Gene PSPTO_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3006 
Symbol 
ID1184662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3380581 
End bp3381015 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID637394368 
Productdeaminase AmnE, putative 
Protein accessionNP_792803 
Protein GI28870184 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0930395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA GCATTCAACG CACCAGCGTC GGCGATTTTC CGATCTCGCA AACCGTGACC 
GTGCCTGCCT CGGCCAGCCT GATATTCATC AGCGGCACCC TGCCGGACCT CGCTGACCCA
CACGCCCCGG CGGGCACGCC CGCAGCCTAT GGCAACACGC AGGTGCAGAC CGTTTCGGTG
TTCAACAAGC TGCGCCGGAT TCTGCAGCAA CAGGACCTGG ACCTGGGCGA TATCGTGCAG
CTTCGGGTGT TTCTGGTCGG GGCCGAAGAG ACCGGTGGCA AACTGGATTT TGCCGGGTTG
CAGGCCGGTT ACACGCAGTT TTTCGGCACG CCCGAGCAAC CCCTGAAACC TGCGCGCACG
GCGCTGCAGG TGGTGGCGTT GCCATTGCCG GGGGCGCTGA TCGAGGTAGA AGCCGTGGCG
GCCAGATCCG CGTGA
 
Protein sequence
MSDSIQRTSV GDFPISQTVT VPASASLIFI SGTLPDLADP HAPAGTPAAY GNTQVQTVSV 
FNKLRRILQQ QDLDLGDIVQ LRVFLVGAEE TGGKLDFAGL QAGYTQFFGT PEQPLKPART
ALQVVALPLP GALIEVEAVA ARSA