Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3006 |
Symbol | |
ID | 1184662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3380581 |
End bp | 3381015 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637394368 |
Product | deaminase AmnE, putative |
Protein accession | NP_792803 |
Protein GI | 28870184 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0930395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA GCATTCAACG CACCAGCGTC GGCGATTTTC CGATCTCGCA AACCGTGACC GTGCCTGCCT CGGCCAGCCT GATATTCATC AGCGGCACCC TGCCGGACCT CGCTGACCCA CACGCCCCGG CGGGCACGCC CGCAGCCTAT GGCAACACGC AGGTGCAGAC CGTTTCGGTG TTCAACAAGC TGCGCCGGAT TCTGCAGCAA CAGGACCTGG ACCTGGGCGA TATCGTGCAG CTTCGGGTGT TTCTGGTCGG GGCCGAAGAG ACCGGTGGCA AACTGGATTT TGCCGGGTTG CAGGCCGGTT ACACGCAGTT TTTCGGCACG CCCGAGCAAC CCCTGAAACC TGCGCGCACG GCGCTGCAGG TGGTGGCGTT GCCATTGCCG GGGGCGCTGA TCGAGGTAGA AGCCGTGGCG GCCAGATCCG CGTGA
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Protein sequence | MSDSIQRTSV GDFPISQTVT VPASASLIFI SGTLPDLADP HAPAGTPAAY GNTQVQTVSV FNKLRRILQQ QDLDLGDIVQ LRVFLVGAEE TGGKLDFAGL QAGYTQFFGT PEQPLKPART ALQVVALPLP GALIEVEAVA ARSA
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