| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2965 |
|---|
| Symbol | |
|---|
| ID | 1184619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 3334867 |
|---|
| End bp | 3335259 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394325 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_792762 |
|---|
| Protein GI | 28870143 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0208057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGT TCGATATACA CCGTAAAACC CCATTTGACG CCCTTGTACA TGAGTACGGG
CTCGACGGCA GCCGTCTGCT GCCGTGGGAA GGTTATCCGA TGCCGTTCGC CGGTGGCTGG
TGCGTGGTCC GCCCCGGCAC AAGCAGCACG GCGCACACCC AGATCGACCA AGAGATTTTC
ATTGCCATCA AGGGCAATGC GCGGCTGGTG GTGGGTGACA GACAGATGGA TTTTGCGGTG
GGCGACATTG CCGCCATTCC GAAACACACC GATCACTACG TCATCAATGA TTCCACCGAG
GACTTCCACT TCTACGTGGT GTGGTGGGAC ATGAACCACG TCAACGCCTT CGTCGCGCAG
CACAGCGAAA CCACGGGGTG CCTCGATGAG TAA
|
|---|
| Protein sequence | MEKFDIHRKT PFDALVHEYG LDGSRLLPWE GYPMPFAGGW CVVRPGTSST AHTQIDQEIF
IAIKGNARLV VGDRQMDFAV GDIAAIPKHT DHYVINDSTE DFHFYVVWWD MNHVNAFVAQ
HSETTGCLDE
|
|---|
| |