Gene PSPTO_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2941 
Symbolfcs 
ID1184595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3303977 
End bp3305746 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content62% 
IMG OID637394302 
Productferuloyl-CoA-synthetase 
Protein accessionNP_792739 
Protein GI28870120 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCCC TGGAACCGTT GGCGCCGTTG CCCGATCGGT TGCTCGACCG GCTGGTGCAC 
TGGGCCAGCC TGCGTGCGCA ACAAACCTTT ATTGCCGCCC GTGACAGCCG TGGTGGCTGG
CGCAAGGTCA GTTACGCCGA CATGCTCACC GACGTTCGCG CCATTGCCCA GAGCCTGCTG
GCTTACGGGC TTTCGGCAGA GCGGCCACTG GCGCTGCTGT CGGGTAACGA CATCGAGCAT
TTGCAGATCG CTTTGGGCGC TATGTACGCC GGTATTCCTT ATTGCCCGGT GTCACCGGCT
TACTCGGTTC TGTCGCAGGA CTTCGCCAAA TTGCGGCATG TCTGTGAGGT GTTACAGCCA
GGCCTGGTGT TTGTCAGCGA TGCCGCGCCG TTCCAGCGCG CCATCGATGC TGTCATACCG
GCTGACACAC CGGTCATTAC GGTACGCGGA CAGTTGAATG GCCGGCGTCA TTCGAGCTTT
GCCAGCCTGC TTGAACAACC GGGCGGCAGC GAAGCCGACG CTGCGTTCAT GGCCAGCGGG
CCGGACAGCA TTGCCAAGTT TCTTTTCACC TCGGGCTCGA CCAAACTGCC CAAAGCAGTG
GTTACCACTC AGCGCATGCT GTGTGCCAAT CAACAGATGC TGCTGCAAAC CTTCCCGGTG
TTCGGCGAAC AGCCGCCGGT GCTGGTGGAC TGGCTGCCGT GGAATCATAC CTTCGGCGGC
AGTCATAACC TCGGTATCGT GCTCTACAAC GGCGGCACGT TCTATCTCGA CAATGGCAAA
CCGACTGTTC AGGGCTTTGC CGAAACCTTG CGCAACCTCA AGGAAATCTC GCCGACAGCC
TACCTGACCG TGCCCAAAGG CTGGGAAGAG CTGGTCAACG CGCTGGAGCA GGACGCCGAG
TTGCGTGAGC GATTCTTCTC GCGCATGAAG CTGTTCTTCT TCGCCGCAGC CGGTTTGTCG
CAAAGTATCT GGGACCGCCT CGACCGGGTG GCCGAGCAGC ACTGTGGCGA GCGCATTCGC
ATGATGGCCG GGCTGGGCAT GACCGAGGCC GCACCGTCCT GCACCTTTAC CACCGGGCCG
CTGTCGATGG CCGGTTACAT CGGCTTGCCC GCGCCGGGGT GCGAGGTGTG TCTGGTGCCG
GTTGATGGCA AGCTGGAAGG GCGCTTTCGC GGCCCGCACA TCATGCCTGG CTACTGGCGC
TCGCCGCAGC AAACCGCTGA GGTGTTCGAC GAGAACGGCT TTTACTGTTC CGGTGACGCG
ATCAAGCTGG CAGACCCTTC GGCGCCGCAG CTGGGCCTGA TGTTCGATGG GCGTCTGGCC
GAGGATTTCA AACTGTCGTC CGGTGTGTTC GTCAGCGTCG GGCCAATGCG CAATCGTGCG
GTGCTGGAAG GCTCGCCGTA TGTTCAGGAT GTGGTCATCA CCGCACCGGA TCGCGAGTGC
CTGGGGGCGC TGGTGTTTCC TCGCCTGCAC GAGTGCCGAC AACTGGCTGG GCTGGGTGCG
CAGGCGAGCG ATGTCGAGGT ATTGGCCAGC ACGCCGGTAC GCCAGTGGTT TGCCGACTGG
CTGGCACGTT TGAATGAAGG GGCCAATGGC AACGCCAGTC GCTTGGAGTG GATCGCGCTG
CTGGATGAAC CAGCCTCAAT CGATCGCGGC GAAATCACTG ACAAGGGCTC TATCAACCAG
CGTGCGGTGT TGCAGTGGCG CGCCACGAAA GTCGAAGCGC TGTATCGCGA TCAGGATGCC
TCACGGCTCA GTGCCGGGTC GCCAGCGTGA
 
Protein sequence
MRALEPLAPL PDRLLDRLVH WASLRAQQTF IAARDSRGGW RKVSYADMLT DVRAIAQSLL 
AYGLSAERPL ALLSGNDIEH LQIALGAMYA GIPYCPVSPA YSVLSQDFAK LRHVCEVLQP
GLVFVSDAAP FQRAIDAVIP ADTPVITVRG QLNGRRHSSF ASLLEQPGGS EADAAFMASG
PDSIAKFLFT SGSTKLPKAV VTTQRMLCAN QQMLLQTFPV FGEQPPVLVD WLPWNHTFGG
SHNLGIVLYN GGTFYLDNGK PTVQGFAETL RNLKEISPTA YLTVPKGWEE LVNALEQDAE
LRERFFSRMK LFFFAAAGLS QSIWDRLDRV AEQHCGERIR MMAGLGMTEA APSCTFTTGP
LSMAGYIGLP APGCEVCLVP VDGKLEGRFR GPHIMPGYWR SPQQTAEVFD ENGFYCSGDA
IKLADPSAPQ LGLMFDGRLA EDFKLSSGVF VSVGPMRNRA VLEGSPYVQD VVITAPDREC
LGALVFPRLH ECRQLAGLGA QASDVEVLAS TPVRQWFADW LARLNEGANG NASRLEWIAL
LDEPASIDRG EITDKGSINQ RAVLQWRATK VEALYRDQDA SRLSAGSPA