Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2933 |
Symbol | |
ID | 1184587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3297568 |
End bp | 3298149 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394294 |
Product | transcriptional regulator, TetR family |
Protein accession | NP_792731 |
Protein GI | 28870112 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0101224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTCA CCAAGGCGCA GGCGCAGGCG AACCGGGCAC ACATCGTCGA GACGGCATCC ATCCAGTTTC GTGAACACGG CTACGACGGT GTCGGAGTGG CAGACTTGAT GGCCGCTGCA GGTTTTACCC ATGGCGGGTT CTACAAGCAC TTCGGGTCAA AGTCTGACCT GATGGCCGAG TCGGCGGCCT GCTCTATCTC GAAGACGGTG GAGCAATCGA AGGGCATTGA TCCTGCGCAG TTCATCGAGT ACTACTTGTC CCGAGAGCAC CGCGACAATC CCGGCACCGG CTGCACGATG GCCGCACTCA GTGCCGATGC GGCCCGCCAG TCAGAGGCTG TCAAAGCCAC TTTTGCCAAC GGCATCGAAA GCATATTGGC CGCTTCCGTG GCCGCAGGAG CACACGCCGA TGACAAAACG CAGCAACAGG CACGGGCAAA GACCATCGAC CTGTTTGCCC ATGCGTTAGG TGCAGTGTTG CTGTCGCGCA GTTGCCCGGA CGACTCACCA TTGGCAGATG AAATACTCGA AGTGTGCCGT GCGAAAATGC AGGCGCAGTT AGCGTACGCG CAGGCCTCCT GA
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Protein sequence | MRVTKAQAQA NRAHIVETAS IQFREHGYDG VGVADLMAAA GFTHGGFYKH FGSKSDLMAE SAACSISKTV EQSKGIDPAQ FIEYYLSREH RDNPGTGCTM AALSADAARQ SEAVKATFAN GIESILAASV AAGAHADDKT QQQARAKTID LFAHALGAVL LSRSCPDDSP LADEILEVCR AKMQAQLAYA QAS
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