Gene PSPTO_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2933 
Symbol 
ID1184587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3297568 
End bp3298149 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID637394294 
Producttranscriptional regulator, TetR family 
Protein accessionNP_792731 
Protein GI28870112 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTCA CCAAGGCGCA GGCGCAGGCG AACCGGGCAC ACATCGTCGA GACGGCATCC 
ATCCAGTTTC GTGAACACGG CTACGACGGT GTCGGAGTGG CAGACTTGAT GGCCGCTGCA
GGTTTTACCC ATGGCGGGTT CTACAAGCAC TTCGGGTCAA AGTCTGACCT GATGGCCGAG
TCGGCGGCCT GCTCTATCTC GAAGACGGTG GAGCAATCGA AGGGCATTGA TCCTGCGCAG
TTCATCGAGT ACTACTTGTC CCGAGAGCAC CGCGACAATC CCGGCACCGG CTGCACGATG
GCCGCACTCA GTGCCGATGC GGCCCGCCAG TCAGAGGCTG TCAAAGCCAC TTTTGCCAAC
GGCATCGAAA GCATATTGGC CGCTTCCGTG GCCGCAGGAG CACACGCCGA TGACAAAACG
CAGCAACAGG CACGGGCAAA GACCATCGAC CTGTTTGCCC ATGCGTTAGG TGCAGTGTTG
CTGTCGCGCA GTTGCCCGGA CGACTCACCA TTGGCAGATG AAATACTCGA AGTGTGCCGT
GCGAAAATGC AGGCGCAGTT AGCGTACGCG CAGGCCTCCT GA
 
Protein sequence
MRVTKAQAQA NRAHIVETAS IQFREHGYDG VGVADLMAAA GFTHGGFYKH FGSKSDLMAE 
SAACSISKTV EQSKGIDPAQ FIEYYLSREH RDNPGTGCTM AALSADAARQ SEAVKATFAN
GIESILAASV AAGAHADDKT QQQARAKTID LFAHALGAVL LSRSCPDDSP LADEILEVCR
AKMQAQLAYA QAS