| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2928 |
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| Symbol | |
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| ID | 1184582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3291838 |
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| End bp | 3293511 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394289 |
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| Product | DnaJ domain protein |
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| Protein accession | NP_792726 |
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| Protein GI | 28870107 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0540178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTGCT GGTCTATTCT GGGGCTTGAT CCCCATTCTG ACGTGCGCAG TATCAAGCGC
CGTTATGCTG CGTTGCTCAA GCAGCACCGC CCGGACGAAG ATCCGGCAGG CTTTCAGCGC
CTGCGTGACG CCTACGAGCA AGCGCTGAGC TGGACCGCCG ACGTTCAGGA ACCGCCAATA
GATCAGGACG GCCTGTCGCA TGCGCCGATC GTTGTACTGC CGTCGCCGGT TCAGACTTTC
AGCGCACCCG ACCTGAAACG CCAAAGGGCT GACCTGCTGC TCGAAGGTAT AAGTGCAGAG
AACCTGGATC AGCGATTGGA AAACGCCCGA ACCACACAGT GCGATCGGGC GTTTGAAGAC
GGTTTGCTGG AGTATTGCCA GTCGAATGCT CCCGATGCAT GTGAACTGGC GGAGCGAGCA
GTCGAGCGCT TTCAGTGGCT GAGCGCCTGG CAACGCATCG ACCTGCCCTT GCATTCAACC
CACACTGTTC TGAACAATCT GTTACGTAAT ACCGAACAGA TGTTGGCCAA CGCGCTAAAC
AGCGGCAATG CCGAGTCCTT CTCCAATGTT TACCTACACC TCGACAAGGT CGCCTGGATG
CAGACGCTGG ACCGACGTAT CTGGCTTAAC AACTATCTCG CAGGACTGCT GGCCCACGCT
GAAGTCTGGC ACAGCCCTGT TTTCGATGCG GTGTGCGAAT GGCAAGGCTG GAAGAAACCC
GATGGCCGCA CATCTTGTCC GGAGCCTTTC TGGAGCCGGT TGCTGGCGCG CAGTCGCCAA
GCCTTGTTTC TCGAAGACCA GCAGCGTCTT GCCACGCAAA AAATCGACAG CACGGGCTCA
CGCGCAGCCC GCCTGCTGTT CATACCCATG AGCGATAATG CTCGCGTGTC GATGACCCTC
CGTTTCACAT CTGATGACTG GCAAACCTGT GAGTCGCTGG CCAATACAGT GGCGCGTCAT
TACCCCGATT TGGCGAGACA TGTGCATGGC GAAGATCTGT ATTTCTGGCG ACCGCTGCGC
CGTTGTACAT CGTTCTGGGC ACTGCCGTTT GCAATCGTTG GCGCAGCGTC CATAACCGCA
TTGGACAGCT ATTACCGGCT GGGAAGTGAT CCGGACGAAA CAATGATCGC TCTATTACTG
ATTATTGGCG CACTTGGTCT GCTGGCGGGT TTGCTTTACG TCGCCTGTCA GACGCTCGGC
GTATTTACCT GGCGCCTTGA TGAGCAACTC ACCAAGCACG TTGGCCGCTG GCTTACGCTA
CGCCGTCCAG TACCGCTGTT GCTGCGAGAA AGCACCGTAA GCTGGCTGCC CGCAGTGCCG
ACCTTCCTGG TCGGAGGATG GAAGGCGTTG CTGATTTACA CCGCAATACT CGCGGTGGCC
GCCGCAGCGA CTCGCGTGGC CTGGCCGGAA TGGCTCAAGC GGACATTTTC AATCGTTCCA
GGCTCGCCGA CCAGAGAACT GATCATTGGC ATCCTGCTGG GTCTGATCGT CTCGTTGCTG
TTCATCTCAG GCACCATCAT CAACTACCGC CCAGTGCAAG CAGGCCAAGG TCTGCAAGCG
TGGCCGAAAC GACTATGCGC AGCCCTTCTC GATGCAAACC AGCCCTGTCG CCCGCCCTCG
CGGGAGCAGT GGTATACACC CTCGTCTTCT CTGGAGGCGG GCCATGATCA GTAA
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| Protein sequence | MSCWSILGLD PHSDVRSIKR RYAALLKQHR PDEDPAGFQR LRDAYEQALS WTADVQEPPI
DQDGLSHAPI VVLPSPVQTF SAPDLKRQRA DLLLEGISAE NLDQRLENAR TTQCDRAFED
GLLEYCQSNA PDACELAERA VERFQWLSAW QRIDLPLHST HTVLNNLLRN TEQMLANALN
SGNAESFSNV YLHLDKVAWM QTLDRRIWLN NYLAGLLAHA EVWHSPVFDA VCEWQGWKKP
DGRTSCPEPF WSRLLARSRQ ALFLEDQQRL ATQKIDSTGS RAARLLFIPM SDNARVSMTL
RFTSDDWQTC ESLANTVARH YPDLARHVHG EDLYFWRPLR RCTSFWALPF AIVGAASITA
LDSYYRLGSD PDETMIALLL IIGALGLLAG LLYVACQTLG VFTWRLDEQL TKHVGRWLTL
RRPVPLLLRE STVSWLPAVP TFLVGGWKAL LIYTAILAVA AAATRVAWPE WLKRTFSIVP
GSPTRELIIG ILLGLIVSLL FISGTIINYR PVQAGQGLQA WPKRLCAALL DANQPCRPPS
REQWYTPSSS LEAGHDQ
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