Gene PSPTO_2874 details

Gene Information

• Locus tag: PSPTO_2874
• ID: 1184528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3236186
• End bp: 3238147
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637394238
• Product: ppkA-related protein
• Protein accession: NP_792675
• Protein GI: 28870056

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0665183
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTTT TGTGCGTAGG TGCCGGCCTG GTCTCGGCGG CCGACAAACC GTTGCTGCAG 
GAAGGCAAAA AGACCCTGTT TCAGCGCGTG CTGACCACGC CGGGTTGCCA CCTGAGCCCT 
GCCGCCGGCG GCCCTGCCGG CGCCGAGCAG CCTCCGTTCA GCCGTTTCTA CGTTTACGAG 
CATGCCAATG CAGGCAATGC CGAATGGATC AAAGTGGGGC CGGACAGCTT CGGTAATACC 
TCCGGGTGGC TGCCAGCATC GTGCACCGTT GACTGGAAAA TGCAGCTCAC CCTGGCATTC 
ACTAACCCGG CCAACCGCGA CAGGCTGATG TTTTTCAAGG AGCGCAAAAC GCTTGAAAGC 
ATTCTGGACG CACCCGACCC GGTAAGCCTC GTCGCCCCGC TACGTGCCAA GCTCAAGCAG 
AGCACGGTGG CACCTGGCGT GCTGGCCCAG GAGCCGGAAT ACTTCATCGA CATGCAAAAG 
CAGTTTTATC TGCTGCCTGT ACTGAGCGGC GAAGAAGTCA TGACCGAAGC GGGGTTTCGC 
ACTCGCATTC TCAATGTGGC GTCGGTGAGC AAGGCCGACG CAGTCGCAGC CGCTCAGCAG 
GCCCAGTCCG GGGCGAGTCA GGGCCAGAAC CCGGCCCAGA CAGCGGCAAA CGCCACCAGC 
CAGCTCAAAG AGTTTAGTGC CGCCGTGGTG TTCGTGATCG ACTCGACCAT TTCCATGGAC 
CCGTACATCG AGCGCACTCG GGAGGCAATC GCCAAGGTCT ACGCGCAGAT TGCCAAGGAA 
AACCTCGGGC GTCAGGTGAA GTTCGGCCTG GTCGCGTTTC GCTCCAGTAC CCAGGCGGTG 
CCGGGGCTTG AGTACGTGAC CAAAATGTAT GCCGACCCCA ATACCGTAAA AGACGGTGCA 
GACTTCCTGG CCAAAGCCGC AGGCCTGAAG CAGGCCAAGG TGTCGAGCAA GAGTTTCAAT 
GAAGACTCCT ACGCAGGTGT GATGCAAGCC ATCGACAAGG TGGACTGGAG CCCGTTCGGC 
GCGCGTTATG TGGTCTTGAT TACCGATGCG GGCGCGCTGG ATGGCGATGA CAAGCTGTCC 
GGGACCGGGC TGAACGCCGA GCAGGTCCGG ATCGAAGCCA GCAACCCGGG TGTGGCCATT 
TACACCCTGC ACCTGAAAAC AGCTGCAGGT GCCAAGGACC ACGCCAAGGC AGAGGCGCAG 
TATCAGGCGC TGTCCACTTA CACGGGCACC AACACTTCGC TTTACTACCC GGTTGACGCG 
GGTGATCTGA ATGCCTTTGG CAGCAAGGTC GATGCGCTGG CCAGCGCTAT CACCGGTCAG 
GTCAAAGCCG CTTATATGGG TGACGACGCG ATTGGCAGCG CCATGAACTC CAAGCCTGCG 
CCCGCCGAAC AGAAGATGCT CGATGACGCC GCGCTTATCG GCCATGCCAT GCGCCTGGCC 
TACCTTGGCG AAAAGACCGG CAGCCAGGCA CCACCGGTGT TTCAGGCGTG GATCGCCGAC 
CGCGACCCGA TCAAGCAGAA CGTCCCGACC ACCGATGTGC GGGTATTGCT GACCAAGTCA 
CAACTCAGCG ACCTGAGTGA TGTGCTCAAG AAAATCCTTG ATGCCGCCAA CGAAGGCATG 
ATCTCCCCAA GCGAAATGTT CGAGCGGCTA CGCTCGGTCG CCGCGACAAT GGGCACGGAC 
CCCAACCAGC TCAAGCAGAA CGGCACCGCC AAGCTGTCGG AACTGGGTGT GTTGGGCGAT 
TATCTGGACG ATTTGCCCTA CCACAGCGAA GTGCTCAACC TGGATGAGGA CACCTGGAAA 
AGCTGGGACG GTCTTGCGCA AGAGAAATTC ATCCGTACGT TGTCGACCAA GCTGCGTCAC 
TACCAGGTCT ACAACGCCGA TGTGGATCGC TGGGTTCCAT TGGCCGAAGG CAGTGATGCG 
CGTGACAACG TGTATCCGGT GCCCCTGGAA ATGATGCCCT GA 

 

Protein sequence

MAFLCVGAGL VSAADKPLLQ EGKKTLFQRV LTTPGCHLSP AAGGPAGAEQ PPFSRFYVYE 
HANAGNAEWI KVGPDSFGNT SGWLPASCTV DWKMQLTLAF TNPANRDRLM FFKERKTLES 
ILDAPDPVSL VAPLRAKLKQ STVAPGVLAQ EPEYFIDMQK QFYLLPVLSG EEVMTEAGFR 
TRILNVASVS KADAVAAAQQ AQSGASQGQN PAQTAANATS QLKEFSAAVV FVIDSTISMD 
PYIERTREAI AKVYAQIAKE NLGRQVKFGL VAFRSSTQAV PGLEYVTKMY ADPNTVKDGA 
DFLAKAAGLK QAKVSSKSFN EDSYAGVMQA IDKVDWSPFG ARYVVLITDA GALDGDDKLS 
GTGLNAEQVR IEASNPGVAI YTLHLKTAAG AKDHAKAEAQ YQALSTYTGT NTSLYYPVDA 
GDLNAFGSKV DALASAITGQ VKAAYMGDDA IGSAMNSKPA PAEQKMLDDA ALIGHAMRLA 
YLGEKTGSQA PPVFQAWIAD RDPIKQNVPT TDVRVLLTKS QLSDLSDVLK KILDAANEGM 
ISPSEMFERL RSVAATMGTD PNQLKQNGTA KLSELGVLGD YLDDLPYHSE VLNLDEDTWK 
SWDGLAQEKF IRTLSTKLRH YQVYNADVDR WVPLAEGSDA RDNVYPVPLE MMP