| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2857 |
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| Symbol | |
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| ID | 1184511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3213297 |
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| End bp | 3214631 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637394221 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_792658 |
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| Protein GI | 28870039 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0775939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACGC AACCAATGCC TATTTTTGAG ACCTACGAGA TCTTCATTGA TACGGACTTT
AGTTTGCGCG AATCCAGTAT GGTTTGTGTT CGTGACTATA TTGGTAATTT TCCGCGCTCA
GTTAAGGCAC ATAAGGGCTA CCTCACGGCG CGAGATTTTC TTCGAGCGTT TTCAGACAAT
AACCTGACAT TTACTTCATA TAGGACGCAT GTCGAGCGCT TGCTTTTATG GGCACTAATC
ATAAAGAAAA AGCCGTTCTC ACAGCTCAAG CGCCAGGATG CTGAAGACTA CCTTGAATTT
TGCCGTAACC CGCCTGCTGA GTGGATCGGC ACCATTGTGC GTGGTCGTTT CGTCACCAGC
GACCATACCG AGTCGACGCG GGGTGAACCG GTCATTCCGA ACCCAAAATG GAGACCATTC
AGCCTAAAAC GTGCGAAGGT TTTTTCGGGC GAGCTGAAAG CGCCTTTAAA CAATCACCCC
CGGGATCTTG AGCTTAGCGT GGATCAGGAT GCCGCGATGC AATACAAGGC CTCGCCAAGC
ACCCTCAATC AGATTTACAC AATCTGCAGC CGTTTCTTTG AATACATGGT CGAGGACGGT
ACGGTCGCAG CCAACCCGTT CAGGATGATC AAGAAGAAAA GCCTCAGCCG TGGCACCCCT
CAAGAGGAAG GGACAAATCG CGCTCTGACT CCTTTGCAGT GGGACTACGT GCTTGAGACT
GCGGAGCGAA TGGCGCTTGA GGAACCCGAA CGGCATGAGC GCACCCTTTT CATTGTGGCG
ACCCTGTTCG CGATGTACCT GCGGGTATCT GACATCGTCG GCAGGCCGAA TTGGCGCCCA
GTGATGGGGA ACTTCCGGCT AGATCCGGAT GGCAACTGGT GGTACCACGT GGTCGGCAAA
GGCAACAAAG CCGGGAAGGT TGCGGTCAGG GACGAGTACA TTTCTAAGTA CCTGACGAGG
TACCGTAGGT TTATTGGGTT GCCTGCACTG CCCGGTTGGA ATGATCAGAC TCCCCTGCTT
ATGACTATCC GAGGTCGTTC AGGGTTGTCG GGGCGACAGG TACGTGCCCT CCTCCAATCA
GTGTTCGATA ATGCCCTAGC GCGAATGCGC CATGAGGAGC GCGAAGAGCA TGAGATGAAC
AGCCTGCGGG CGGCTTCCGC GCACTGGCTC AGACATACCT CTGCGACGTT TGACGCCCCG
CTGAGAAGTC CAAAGGACTT GCAGATGGAC TTGCGCCATA GCAGTCTCAG CACAACTCAG
AATGTCTACT ACCACTCGCA TGACCAAGAG CGAAGCCGTT CAGTGCGTGG CGTAGGCATG
CGCGACAGAG GTTAG
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| Protein sequence | MSTQPMPIFE TYEIFIDTDF SLRESSMVCV RDYIGNFPRS VKAHKGYLTA RDFLRAFSDN
NLTFTSYRTH VERLLLWALI IKKKPFSQLK RQDAEDYLEF CRNPPAEWIG TIVRGRFVTS
DHTESTRGEP VIPNPKWRPF SLKRAKVFSG ELKAPLNNHP RDLELSVDQD AAMQYKASPS
TLNQIYTICS RFFEYMVEDG TVAANPFRMI KKKSLSRGTP QEEGTNRALT PLQWDYVLET
AERMALEEPE RHERTLFIVA TLFAMYLRVS DIVGRPNWRP VMGNFRLDPD GNWWYHVVGK
GNKAGKVAVR DEYISKYLTR YRRFIGLPAL PGWNDQTPLL MTIRGRSGLS GRQVRALLQS
VFDNALARMR HEEREEHEMN SLRAASAHWL RHTSATFDAP LRSPKDLQMD LRHSSLSTTQ
NVYYHSHDQE RSRSVRGVGM RDRG
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