| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2846 |
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| Symbol | |
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| ID | 1184500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3196253 |
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| End bp | 3198439 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394212 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_792649 |
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| Protein GI | 28870030 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0306235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTCCA CCAAGAACAA GCCGCTGTTT CACATTGACC CATCGTGTCT GCGTTGGCGC
CATGCGTTTT GTATGTTTCT GGGGCTGGCA TTACCCGTCA TTGCCCATGC CTCGCAGCCG
GAGGACGGCA CCGTCGGTTC ATCACCAACC CCCAAAAGGC TACAGACTTG GACGTTGGAA
CCTATCACCG TTACAGGGGC GCGCGAAGGC TATTCCGCAC CCACTTCTAC TTCGGCCACG
CGCACCAATA CGCCCTTGAT CGAAGTCCCG CAGTCGGTAC AAGTTGTCAC CCAATCGATG
ATTAGAGAGC AGGGTAGCCA CTCGCTTTCC GACGCATTGG TTAATGTCTC GGGTGTGAGA
GCGACCAAGC CTCAGGAGGC ACTGTTCGCG CAACCCATCG TGCGCGGTTT TCCTGCAGAA
ATTTATATGA ACGGGCTGCC GGCCTTCGGT GGCACAGCGG CGAGCATCGA TCCGACCAGT
CTGATCGGCA CCGAGCGTAT CGAGGTGCTC AAAGGCCCAA CATCGACCCT TTACGGAGGC
GGGATCGGCG CGCCGCTGGG CGGCTTGATC AACGTGATTT CGAAACGTCC CGAGGCCGAG
CCGAGTGCGT TTGTTTCGAT GCGCACCGGT AGCTTCGGTA CGGTGAATCC GTCGGTTGAT
CTCAACACAC CCATTGGGGA CAAAGTCGCC GCACGGTTTT CCGCTGACTA CCAGGAAAAT
GACAGCTGGA TTGATCACGT CAACGGCCAC CAATGGTCAA TACAGCCAAG CATCGCGTTT
CAGCTCTCGC CAGATACCGA GTTGCTGCTG CGCGGCAGGT ACGAGGATCG CAGTCAGCTG
GAATTTTCTG GCCTGCCATC CGCCCAGGCG TTGAGTGGGC ATATTGACCG CAAGGCTTTC
CCGGGCGCTA CCAGTGGGCA GCCGCACACC ACCATCGAGA ATCGTACAAC TACCGCCGAA
CTCACTCATG AGTTTAATGA GGACACACGA CTTGCCGTCA CCGCTCAGTA TTACGAAGGC
AAGTTTCGTG ACTATGGAAG CTTTGTTTAT CCAGAGCTTC TAGGGGCTGG CCCTGCGACG
CCAACGGTGT ATCCGATTTT CAAGCTCTAC CTGCCAGGAG ACGTTCGTGA AAGCACGCTG
GATACTAACT TGGGCACCCG GGTCGAGGCT CTGGGCGGCA GCCACGAACT TTTAGTGGGC
GCCAGTTATG ACCGTACAGA CTTCGCATCG GGAGTATCCA ACGCCGAGCT GATCGGCGAG
CTTGATCTGG CCAATCCGAG CTACGGGGTT TCCTACGGAG CGACGCCCGA AACAATAGTT
TCCCAGACCA ACCGCTACGA GACAAAAGCT CTCTACATTC AGGATCAAGC GACCTACGGC
CGCTTACATC TGTTGGGATC GTTGCGCCTG ACCCAACTCG ACCTCAAGCA ACAAGAGCAA
GGTATTGATA CTTCATATCA TCGTGTGACG CCACGCCTTG GCATCACCTA TGACCTGACC
GACAGTCTCG CGCTTTATGC GGCTTACTCT ACCGGCTTTA GAGGTGCGTA CAACTACAAC
GGTCGCGAGA CACCGAAGCC TGAGTTGTCT CGCAACTATG AGGCGGGCAT CAAGATGGCG
TTTAACGATT TGGGGCTTTC CGGCACCCTC GCGGTGTTCG AACAGACTCG TCGCAACGTG
TCGACTCCTG ATCCCGATCC TGCAAACGCG ATTCTCGGCT ACTCTGTGCA AAGCGGCGAG
CAACGCGCTC GGGGGGTAGA GGCAGATTTG GTTTGGGAGC CGATTCCGGC CTTTTCGTTG
CTGACCAGCT ATGCCTACAC CCAGGCAGAA GTGACAGACG ACAATTCGAT TCCGATTGGT
GCCGGATTGC CACGCGTACC TCGGTACAGC GGTCGTCTCG CAGCCCGCTA TCGAATACTC
GATGGTGCTG CCAAGGGACT GGGTTTTGGT GCAGGTATTA CTGCGCTCAG CGCACGCGAG
CTGACCCTGC CCAATACCGT CTCTGTGCCG GGATATGCAC TGCTCGATGC ACAGACTTCC
TACGAGTTTG ACCATTACAC GGTCTCCGTA TCAGCGGTCA ATCTGACCGG TCGCAAGGTC
TTCGAGACTT ACCAATATCT GGGTTCGCCA GTGGTATTAC CGACCCAACC ACGCTCAGCT
TTTTTGACGC TGACAGCCAG CTTTTAA
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| Protein sequence | MYSTKNKPLF HIDPSCLRWR HAFCMFLGLA LPVIAHASQP EDGTVGSSPT PKRLQTWTLE
PITVTGAREG YSAPTSTSAT RTNTPLIEVP QSVQVVTQSM IREQGSHSLS DALVNVSGVR
ATKPQEALFA QPIVRGFPAE IYMNGLPAFG GTAASIDPTS LIGTERIEVL KGPTSTLYGG
GIGAPLGGLI NVISKRPEAE PSAFVSMRTG SFGTVNPSVD LNTPIGDKVA ARFSADYQEN
DSWIDHVNGH QWSIQPSIAF QLSPDTELLL RGRYEDRSQL EFSGLPSAQA LSGHIDRKAF
PGATSGQPHT TIENRTTTAE LTHEFNEDTR LAVTAQYYEG KFRDYGSFVY PELLGAGPAT
PTVYPIFKLY LPGDVRESTL DTNLGTRVEA LGGSHELLVG ASYDRTDFAS GVSNAELIGE
LDLANPSYGV SYGATPETIV SQTNRYETKA LYIQDQATYG RLHLLGSLRL TQLDLKQQEQ
GIDTSYHRVT PRLGITYDLT DSLALYAAYS TGFRGAYNYN GRETPKPELS RNYEAGIKMA
FNDLGLSGTL AVFEQTRRNV STPDPDPANA ILGYSVQSGE QRARGVEADL VWEPIPAFSL
LTSYAYTQAE VTDDNSIPIG AGLPRVPRYS GRLAARYRIL DGAAKGLGFG AGITALSARE
LTLPNTVSVP GYALLDAQTS YEFDHYTVSV SAVNLTGRKV FETYQYLGSP VVLPTQPRSA
FLTLTASF
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