Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2845 |
Symbol | |
ID | 1184499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3195668 |
End bp | 3196132 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394211 |
Product | hypothetical protein |
Protein accession | NP_792648 |
Protein GI | 28870029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00459399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGCCC ATCCCTGGAT ACGACGGGCA ACCGCCGTTA TCGAACGCTG TGCGCGAAGA GTAGAGCGCC TGCCAGTCCG TGAGCGTCCA GTTATCGGAG CGTGGCTGAG TCTTTTCGCC ATGCTGATGA TATTTGTCGG CCCGCTGATC AGTCAGGGGA TCAGCCTTGT CCATGGTAAA AGCCAGTCAA TGAGCATGGC GGGCATGGAG TGCCACGACA TGCCTGGCAT GAGCCAGATG TCGCACCATG GCTCTGCTGA CAGGCACCAT GATCTGATCG TTTGGGAAAA GTGCGGCTAT TGTTCGCTGC TGTTCCAAAA CCCAGCGCTC ATCGAGTCAA ATCTGGCTGG CTTTCGGCTA ACTGTCCCAC CGTTACAGTA TCTACCTGCC CGCTTTATCA CTCGTCAAAC AGCACCACCG GTGTTCCCTG GTGCGCGAAG CCGAGCCCCA CCTATCAACC TTTGA
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Protein sequence | MDAHPWIRRA TAVIERCARR VERLPVRERP VIGAWLSLFA MLMIFVGPLI SQGISLVHGK SQSMSMAGME CHDMPGMSQM SHHGSADRHH DLIVWEKCGY CSLLFQNPAL IESNLAGFRL TVPPLQYLPA RFITRQTAPP VFPGARSRAP PINL
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