Gene PSPTO_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2845 
Symbol 
ID1184499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3195668 
End bp3196132 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID637394211 
Producthypothetical protein 
Protein accessionNP_792648 
Protein GI28870029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00459399 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGCCC ATCCCTGGAT ACGACGGGCA ACCGCCGTTA TCGAACGCTG TGCGCGAAGA 
GTAGAGCGCC TGCCAGTCCG TGAGCGTCCA GTTATCGGAG CGTGGCTGAG TCTTTTCGCC
ATGCTGATGA TATTTGTCGG CCCGCTGATC AGTCAGGGGA TCAGCCTTGT CCATGGTAAA
AGCCAGTCAA TGAGCATGGC GGGCATGGAG TGCCACGACA TGCCTGGCAT GAGCCAGATG
TCGCACCATG GCTCTGCTGA CAGGCACCAT GATCTGATCG TTTGGGAAAA GTGCGGCTAT
TGTTCGCTGC TGTTCCAAAA CCCAGCGCTC ATCGAGTCAA ATCTGGCTGG CTTTCGGCTA
ACTGTCCCAC CGTTACAGTA TCTACCTGCC CGCTTTATCA CTCGTCAAAC AGCACCACCG
GTGTTCCCTG GTGCGCGAAG CCGAGCCCCA CCTATCAACC TTTGA
 
Protein sequence
MDAHPWIRRA TAVIERCARR VERLPVRERP VIGAWLSLFA MLMIFVGPLI SQGISLVHGK 
SQSMSMAGME CHDMPGMSQM SHHGSADRHH DLIVWEKCGY CSLLFQNPAL IESNLAGFRL
TVPPLQYLPA RFITRQTAPP VFPGARSRAP PINL