Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2843 |
Symbol | |
ID | 1184497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3194491 |
End bp | 3194874 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394209 |
Product | hypothetical protein |
Protein accession | NP_792646 |
Protein GI | 28870027 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00037044 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTGT CCCTACCCAA TCGTTCGCTC GTTGCATGGG CACTTTACTT TTGCGTGCTG TTAAATGTGT TCGCTTGTGG TTTGGGTCAT GGCCAGATGA GCGGGTTCGC ACTCAATGGT ATCGGCGGTG AGTTTTGCTC TGTATCAGGT GGCAAGGCCC CGATCGCCAG TGCGGATTTC TCTGACCAGT CGCCCAGCGG TTGGGCCGGT AGTCTTGTCT GCCCTATCTG TTCTGCTGTG ACATTAAGCA TCGTTTTTCT GCTGCGCCTG ATCTGGCTGT TGCGAATCGT CCAGAAGCCA CGCCTTGGTC GTGAGCTTCG CTGCAAGGCA CCCCCTCGAT ACTCTTGGCC GTCGGCCAAC CCTCGCGCTT CTCCCCTGAT CTGA
|
Protein sequence | MKLSLPNRSL VAWALYFCVL LNVFACGLGH GQMSGFALNG IGGEFCSVSG GKAPIASADF SDQSPSGWAG SLVCPICSAV TLSIVFLLRL IWLLRIVQKP RLGRELRCKA PPRYSWPSAN PRASPLI
|
| |