| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2833 |
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| Symbol | |
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| ID | 1184487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3183334 |
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| End bp | 3184002 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394200 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | NP_792637 |
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| Protein GI | 28870018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAATT CACTACTTCC GCAGATTGGC AGGGCCATCG CCAGCATTGG CAGCGGCCAT
TTTTCCAGCA TGTTCCACAA GTTGATCGTG AGTCAGCTCG CCGTGGATGC CACGCACCTG
TCCTCGCTGC CGCAGGCCTG GCAGACCCCG CCCGCCTCGG CACCGACGGT GTTCAACGAG
ACGGTGACGT CCGCGCGCGG CACTTTGCTG CTCAATGATT CGATTCATCT TTACCCTGCG
CAGGCTTCTG AAAACTTTAG TTGCAAAATA TCGGTCTTCC GGGCGCTTCC TGCCCATGAG
TTTTCTGAAG AAGAGCGCCG CCAGCTGAAT GATCTTTCTC CGCTTCTGTT CTCGATACTC
GAAAAACACG TGAATGCCTT ACAACTTGCG ATGCCCGGAA CCGAGTCCGC CAGGACGGAG
AGTTTTGAAG AGCGTTTCCA TGAGCGCCTG CGTGAGACCG GGCTGACCCT TTCCGAACGC
GAGACGCAGG TTTGTCTCGG CCTGCTCGCA GGCCACACCG CTATCGAACA GGCCGAGCGT
TTGGCGCTCA AGGTCAATAC CGTCGGCAGT TACCAACGCC GTGCCGCGAT CAAACTGGGC
ATCAGTGGCA GGCATTCGCT GATGCGCTGG ATGTATGCGT CGTCCGAGAG CAATTATTCG
CCCTGCTGA
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| Protein sequence | MPNSLLPQIG RAIASIGSGH FSSMFHKLIV SQLAVDATHL SSLPQAWQTP PASAPTVFNE
TVTSARGTLL LNDSIHLYPA QASENFSCKI SVFRALPAHE FSEEERRQLN DLSPLLFSIL
EKHVNALQLA MPGTESARTE SFEERFHERL RETGLTLSER ETQVCLGLLA GHTAIEQAER
LALKVNTVGS YQRRAAIKLG ISGRHSLMRW MYASSESNYS PC
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