| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2818 |
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| Symbol | |
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| ID | 1184472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3142091 |
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| End bp | 3143482 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394185 |
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| Product | fatty acid desaturase |
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| Protein accession | NP_792622 |
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| Protein GI | 28870003 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00236811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTGC TGGTCACCGG CCTGCTGTAC TTTCTGGTTA CGCATGTGCC CATGGGTTCT
GTGCGCCTTG TGCAGCCCTC AGGTGTCGAC GCCCATGTTC CCCTGCTCCC GTTCACGCTG
CCGCTGTACC TCAGTTACAC GCTGGTCATG CCGGTGCTCG TGTACATGGG GCGTCAGTCG
TCATGGCTGC TGCCGACGTT TTTTGCCGGT GCTCTGGCGG CGGGCCTGTG TCTGGTCTGT
CATCTGTTCT GGCCCACCAT GATCCTGCGT CCTGAAACCG GCGCTGCCTG GCTCGACTGG
CTGTACCAGC TCGATGCACC ACTGGCCGCT TCGCCCAGCG GGCACGTGGC ATTGCCTGTG
GCCATCAGCG TTGCAATGGC TGGCCTGCGA CTGCAAAAGG CCTGGGTATT TGCCGTCTGG
AGTGTGGTGC TGATGCTGAC GGTGATGACC ACCGGGCAGC ATGTGTTTAC CGACATGGCC
TATGGCGCGG CCATCGGTGT CGCCTGCGGC GCGGCGACGC TGATCTTCAA GCGCTGCGCG
GTAGACCTGC GCACCCTGTC TGCGCTGCTG CTTGAATGGC TGTGCATCCT GGTCACGATC
CGCGTTGCGC TTTATCTCGC AGACTGGCGT TTCTACCTGT TGGCCATGCT CATCGTTGCA
GCACGCCAGC ACGCGCTGTT CGTGCTGTAC CACGACGCCA CCCACTACAA CCTGACCCGC
CGACGCAGCA CCAACGACTT CCTGATCAAC CTGGCGATCG GTGTTCCGGG CCTGGTGCCC
ATCGAATTCT ATCGCCCGCT GCACCTGGAT CATCATCAGC ACGCCGGGAC CGAGCAGGAC
CCGGAGCGCC GGTTTCTCTA TTACCGTCAG CCGTGGCGTT TCCAGCCGCT GAGCGCGAAG
CTACTGCTCA GGCAACTGCT GGGTGACCTG CTGATGGTCA ATACGCTGCG CAACATCGCG
GCCTACAAGG CTGCCGGTGG CGCGCCGCCA AAGATCACCC GACCGTTGAT TTCGGCAGCG
CTGGTGTGGC TGATGATTGT GGCGTGCCTT GTCTGGCAAT GCTCGATAAG GGAAGTGGGC
ATGCTGGCAA TGCTGTGGTT CATCCCCTTG GTCACCGTCG GCACCCTGCT ACAGAAAATC
CGCAGCATTG CCGAACACAG CGGCGGCCCC GGCGTCACGC CCGGCTGGCA GGAATGGACG
TACGCCTGGC GCGTCGGCTG GCTGGGACGG TTTTTCATCT GGCCTTACCA CATCAACCTG
CATCTGCAGC ATCACCGCAC TGCAAGCATC CCTTGGCACG CCTTGCCCAG TGCCGTTGGC
AAAGACGAAA AACTCATGCC ATCGCGGGCT TTGCCAGCGC TGATGTGGTC AGGGCTGCGG
CGCAAAACCT GA
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| Protein sequence | MYLLVTGLLY FLVTHVPMGS VRLVQPSGVD AHVPLLPFTL PLYLSYTLVM PVLVYMGRQS
SWLLPTFFAG ALAAGLCLVC HLFWPTMILR PETGAAWLDW LYQLDAPLAA SPSGHVALPV
AISVAMAGLR LQKAWVFAVW SVVLMLTVMT TGQHVFTDMA YGAAIGVACG AATLIFKRCA
VDLRTLSALL LEWLCILVTI RVALYLADWR FYLLAMLIVA ARQHALFVLY HDATHYNLTR
RRSTNDFLIN LAIGVPGLVP IEFYRPLHLD HHQHAGTEQD PERRFLYYRQ PWRFQPLSAK
LLLRQLLGDL LMVNTLRNIA AYKAAGGAPP KITRPLISAA LVWLMIVACL VWQCSIREVG
MLAMLWFIPL VTVGTLLQKI RSIAEHSGGP GVTPGWQEWT YAWRVGWLGR FFIWPYHINL
HLQHHRTASI PWHALPSAVG KDEKLMPSRA LPALMWSGLR RKT
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