| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2808 |
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| Symbol | |
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| ID | 1184462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3132407 |
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| End bp | 3133357 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394176 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_792613 |
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| Protein GI | 28869994 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.464629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGC GTCAGCTCGA AGCCTTCGCG GCGGTCATGT CGGCGGGCAG TGTCACTGCC
GCCGGGAAAA TGCTCGGCCG CTCTCAGCCA TCGGTCACTC GGGCCATTCA GGAGCTTGAA
CAGGAACTGG GCTTTGCGCT TTTCGAGCGC AGCGGGCCGA AGGTCACGCC TACCCACAAG
GCGTTCATGA TGTATGGCGA GGTGGAAAGC GCGCTGCTGG GCGTGCGTAA TATCCGCCAG
CGTGCGCAAC ACATTGCGCA GGAAGAAAAC CATCAGATCA AGCTGGTGGC AATCTCGGCC
CTTGCTGCCG GGCTGTTGCC CACGGCCTTG TCCCGGCTGC CCGAGCCTCT GCGCCCGCAG
CAGATCCAGT TGCAGAGCAT GTCTCCGGAG AATGTGGTTC AGGCGGTTCT GTCGAAGACT
ATGGATCTGG GGGCTGTAAG CCTGCCGCTG GAACATCGCG GCCTGGAGAT TCACTGGATC
GGCGAAGCGT CCTGCGTGGC GGTGTTGCCA GCCGATTCGC CGCTGGCCGC CCATGACGTG
CTTTCAATGG AGCTGCTGCG CCAGCAAACG CTGATCACCA TGGCCAACCC TTATCGTTTT
CGTCGGCGTA TCGACAAGGC GTTTCACGAT GCCGGCGGCG AGCCACCGCG CATGCTCGAT
ACCAATACCT CGCTGATTGC CATGCAAATG GCCAGAGTGG GGCTGGGCAT TGCGCTGGTC
GACCCGTTCA CCGCCATAGG CGTACCGCTG CAAGACGTAG TGGTCAGGCC GATTGCCTGT
TCCATTCCGT TTTTCTTCGG CCTGATTTCA GCTTTCGCCA GCCCGCTATC GGAGGTCGCG
AGTGCGCTGG TGGAGGAAAT TGCCGTCTGC GCGAAAGTCC TCCTGCCGGA GATGATCATG
CACGAAGCCA GTGCTCACGA TGCGCTGTTG CAGAGCATTT ATGCAGAGTG A
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| Protein sequence | MDLRQLEAFA AVMSAGSVTA AGKMLGRSQP SVTRAIQELE QELGFALFER SGPKVTPTHK
AFMMYGEVES ALLGVRNIRQ RAQHIAQEEN HQIKLVAISA LAAGLLPTAL SRLPEPLRPQ
QIQLQSMSPE NVVQAVLSKT MDLGAVSLPL EHRGLEIHWI GEASCVAVLP ADSPLAAHDV
LSMELLRQQT LITMANPYRF RRRIDKAFHD AGGEPPRMLD TNTSLIAMQM ARVGLGIALV
DPFTAIGVPL QDVVVRPIAC SIPFFFGLIS AFASPLSEVA SALVEEIAVC AKVLLPEMIM
HEASAHDALL QSIYAE
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