| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2807 |
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| Symbol | |
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| ID | 1184461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3131142 |
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| End bp | 3132299 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394175 |
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| Product | GGDEF domain protein |
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| Protein accession | NP_792612 |
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| Protein GI | 28869993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.685296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCGAT GTATCAAGCG GTACAGACCA TTGCCGACAA TTGTTCATGA ATTCGTTTCG
ATACTCATGG TCATACCCAA CCCGCACCTT CGAGAAAACG TGATGATGAC CCTCCAGGCA
GAAGACCGCT CCCAGTTGTT CAAGGACACG GCTGCCCAGT TCTGGACACA CATCACACCG
ATGGTCTATC TCGCTCTCGG GATCCACTGT GTGCTGCTGG CGGTGTTCAT CACGCTGGAC
ATAACGATCC TCTGGGCTGC GAACATCTTC AGCATACTTG CCTATTGCAA CTGTCTTTAC
CTGATTCGCA GACGCCGCTA CCGGCAGACG GGCCAGTTGA TGAGTTTCGA GATCATCGCC
CATGCGGTAC TGGCAACCTG GGTACTGGGG TGGGAAAGCA ACTTCAGCTT CTACCTGTTC
TGCGTGATCC CGATTATCGC GTTCACCTTC CAACTGGTTA CCGTCAAGCG TGTGGTGTTC
AGTGCCGCGG TACTTTTGGC GGCAGCAGGG TGCTTTACGT TTCGTCGCCA CATGGGGCAA
GGATCCAGCT TGAGTAGCGA AATGCTGGAG GTGTTTGGCG TCGTCAACAT TCTTGCCGCA
ACCGTTCTGG CGATCTACGC CACGGCTCTG TCAGTGCGTT TTACATCGTC CATGCAACTG
AGCCTGTATC ACATTGCCAA TCGTGACAGC CTCACCAACC TTTTCACCCG CAGACGGGTG
CTGCACCGCG TGCGTCAGTT GGAGTCGCGT CGCCAGGGGC TGTCGGCCTC GATAATCCTG
CTCGACATCG ATCATTTCAA ACAGATCAAT GACCTGCACG GTCATGAAAC AGGCGATGTG
GTACTGCAAC GAGTGGCTGA GGTCATCAGT TCAAGCGTGC GCAGCAGTGA CATGGCTGCA
CGCTGGGGTG GCGAGGAGTT TTTGATCCTC ATGCCCGACA CAGCACTGAG CGACGGGCTG
CAAGTGGCTG ACCGCATATG GCTGTCCATC CGGGAAAAAG CCGGTCTGAT CGACACGCTC
GACATTGCTG TAACCGCAAC CCTGGCAGTG GCTGCCGTCG GCGAGGGCGA AGCCTTTCAG
ATCGCCCTCA ATCGTGCCGA CACCTCGCTT TACCTGGGCA AGCAGCTAGG CCGAAACCGG
GTCATGGTCG CTGGGTGA
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| Protein sequence | MSRCIKRYRP LPTIVHEFVS ILMVIPNPHL RENVMMTLQA EDRSQLFKDT AAQFWTHITP
MVYLALGIHC VLLAVFITLD ITILWAANIF SILAYCNCLY LIRRRRYRQT GQLMSFEIIA
HAVLATWVLG WESNFSFYLF CVIPIIAFTF QLVTVKRVVF SAAVLLAAAG CFTFRRHMGQ
GSSLSSEMLE VFGVVNILAA TVLAIYATAL SVRFTSSMQL SLYHIANRDS LTNLFTRRRV
LHRVRQLESR RQGLSASIIL LDIDHFKQIN DLHGHETGDV VLQRVAEVIS SSVRSSDMAA
RWGGEEFLIL MPDTALSDGL QVADRIWLSI REKAGLIDTL DIAVTATLAV AAVGEGEAFQ
IALNRADTSL YLGKQLGRNR VMVAG
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