| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2776 |
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| Symbol | |
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| ID | 1184430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3095325 |
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| End bp | 3095987 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394144 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_792581 |
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| Protein GI | 28869962 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.636718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTATC AACTGAATTT TGATGCTGTA TGGCGCGACT TTTCCAACTT GCTGGCCGGG
TTGGGGCTCG GTCTGGAACT GGCGCTGATC TCGATCGCCA TCGGTTGTGT GATCGGCTTG
ATGAACGCCT TCGCATTGTT GTCGCGTTAC CGGGCGCTGC GAATTGTGGC CTCGATCTAT
GTGACGGTGG TGCGCAACAC GCCGATTCTG GTGTTGATCC TGCTGATCTA CTTCGCTTTG
CCCGGCCTGG GCATTCGCCT GGACAAACTG GCGTCTTTTG TCGTCACGCT GTCGCTCTAT
GCGGGCGCGT ATCTGACCGA AGTGTTCCGC GCCGGGTTGT TGAGCATCCA CAAGGGGCAG
CGTGAAGCAG GGCTGGCCAT CGGTCTGGGT GAATGGCAGG TGCGGGCCTA CATTATCGTG
CCGGTGATGT TGCGCAACGT GTTGCCAGCG CTCTCCAACA ACTTTATCTC ACTGTTCAAG
GACACATCGC TGGCGGCTGC CATTGCCGTG CCGGAGCTGA CCTATTACGC GCGCAAGATC
AACGTCGAAA GCTACCGGGT GATCGAAACC TGGCTGGTCA CTACCGCGTT GTATGTGGTG
GCCTGCTACG TGATCGCCAT GCTGCTGCGC ACCCTCGAAC AACGTCTGGC GATTCGCCGC
TAG
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| Protein sequence | MNYQLNFDAV WRDFSNLLAG LGLGLELALI SIAIGCVIGL MNAFALLSRY RALRIVASIY
VTVVRNTPIL VLILLIYFAL PGLGIRLDKL ASFVVTLSLY AGAYLTEVFR AGLLSIHKGQ
REAGLAIGLG EWQVRAYIIV PVMLRNVLPA LSNNFISLFK DTSLAAAIAV PELTYYARKI
NVESYRVIET WLVTTALYVV ACYVIAMLLR TLEQRLAIRR
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