| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2702 |
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| Symbol | xylB |
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| ID | 1184356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2996807 |
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| End bp | 2998288 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394072 |
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| Product | xylulokinase |
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| Protein accession | NP_792509 |
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| Protein GI | 28869890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0029542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCTTG GAATCGACTG TGGCACACAG GGCACCAAGG TGCTGGTGCT CAATGCCGAA
AGCGGCAAGG TACTGGGCGA AGGTTCAGCA CCCCATAGCC TGATCAGCGA CCATAACGGC
CGCCGTGAGC AGGACGTCCA GCAGTGGCTG GACGCACTGC AACAGGCGAC CCGCGATGCC
TTGGCGCAGG CGGGCGTGTC AGGGCAGCAG ATTCAGGGCA TCGGTGTTTC GGGCCAGCAA
CATGGCCTGG TGCTGCTTGA TGCTCAAGGT GAAGTGCTGC GCCCGGCCAA ATTGTGGTGC
GACACCGAGT CCGCCCCGGA AAACCAGCGT TTACTGGATT ATCTGGGCGG CGCACAGGGT
TCGCTGCAAC GCCTCGGTCT GGTCATCGCG CCGGGCTACA CCGTGTCCAA GCTGTTATGG
ACCAAAGAGC AGCACCCACA GGTGTTCGAG CGTATCGACA AGGTGCTGCT GCCCCACGAC
TACCTGAATT ACTGGCTGAC CGGGCGCTGC TGCACCGAGT TCGGCGACGC GTCGGGCACT
GGTTATTTCA ACGTGCGCAG CCGCGAGTGG GACCTGCCAT TACTCGCCCA TATCGACCCT
AGCGGACGGC TGGGCAAAGC GCTGCCTCAA TTGCTTGAGG CCGACGCGCC GGTTGGCACG
CTGCTTCCCG ACATCGCCCG GCTGCTGGGC CTCAACCCGG ACGCCCTGGT GTCCAGTGGC
GGCGGCGACA ACATGATGGG CGCGATTGGC ACCGGCAACA TTCAGCCAGG GCTGATCACC
ATGAGCCTGG GCTCGTCGGG CACGGTGTAC GCTTATGGCG ATGAGGTGCG GGTCAGCGAA
CATGAGTCGG TCGCCACGTT CTGTTCGTCG TCCGGCGGCT GGCTGCCGTT GATCTGCACC
ATGAACCTGA CCAACGCGAC CACGGCCATC CGCGAGCTGT TCGCCCTGAA CATCAAGGAT
TTCAATCAGG CCATCGCTCA GGCACCGATC GGCGCAGAAG GCGTGTTGAT GCTGCCGTTT
TTCAATGGCG AACGCGTGCC CGCCCTGCCC GACGCTACCG CCAGCATCGT CGGGCTGGAC
AGCACCAACC TGACCCAGGC CAACCTGTGC CGCGCCGTGG TCGAAGGCAC CACGTTCGGC
TTGCGCTACG GCCTGGACCT GCTGCGCGAC AGCGGCATCA AGAGCGAGAA GATCCGGCTC
ATCGGTGGCG GTTCGAAAAG CGCAGTGTGG CGACAGATCG TCGCAGATAT CATGAACACC
CCGGTCATCT GCACCGTGCA GCCGGAAGCC GCCGCGCTGG GCGCGGCCAT TCAGGCGGCC
TGGTGCCGGT CGAAGGCTGA CGGTACGCCC GAGGCGCTGC TACAGCTGTG CGAACGGTGC
GTAAGCCTCG ATCCAGACAG CGAGACCCAC CCGGTTGCGC AGAACGTGGC AACCTATCAG
CAGGTCTATC AGCGTTATCA GGCGCAATTG CGCAAGGTTT GA
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| Protein sequence | MFLGIDCGTQ GTKVLVLNAE SGKVLGEGSA PHSLISDHNG RREQDVQQWL DALQQATRDA
LAQAGVSGQQ IQGIGVSGQQ HGLVLLDAQG EVLRPAKLWC DTESAPENQR LLDYLGGAQG
SLQRLGLVIA PGYTVSKLLW TKEQHPQVFE RIDKVLLPHD YLNYWLTGRC CTEFGDASGT
GYFNVRSREW DLPLLAHIDP SGRLGKALPQ LLEADAPVGT LLPDIARLLG LNPDALVSSG
GGDNMMGAIG TGNIQPGLIT MSLGSSGTVY AYGDEVRVSE HESVATFCSS SGGWLPLICT
MNLTNATTAI RELFALNIKD FNQAIAQAPI GAEGVLMLPF FNGERVPALP DATASIVGLD
STNLTQANLC RAVVEGTTFG LRYGLDLLRD SGIKSEKIRL IGGGSKSAVW RQIVADIMNT
PVICTVQPEA AALGAAIQAA WCRSKADGTP EALLQLCERC VSLDPDSETH PVAQNVATYQ
QVYQRYQAQL RKV
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