| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2676 |
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| Symbol | fdhA-2 |
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| ID | 1184328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2971649 |
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| End bp | 2972788 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394044 |
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| Product | glutathione-independent formaldehyde dehydrogenase |
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| Protein accession | NP_792483 |
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| Protein GI | 28869864 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.976197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA TCGTCTATAA CGGTCCGCGC GACGTCAGTG TCAAAAACGT GCCGGATGCG
AAGATAGAGA AGCCGACAGA TGCTCTTGTC AGAGTGACGA CCACCAATAT CTGCGGCTCG
GATCTGCACA TGTACGAAGG TCGTACGTCA TTCGAGACCG GACGTATTTT CGGTCATGAA
AACATGGGCG AAGTTATCGA GGTCGGCGCA GGCGTGGACC GTGTCAAGGT GGGCGACCGG
GTTTGCCTGC CATTCAATAT TGGCTGCGGG TTCTGCGAAA ACTGCGAAAA AGGCCTGACC
GGTTACTGCC TGACCGCAAA CCCCGGCAGC GCAGGTGCTG CCTACGGTTT CGCTGAAATG
GGCAGCCACG AAGGCGGCCA GGCCGAACTG CTGCGCGTGC CTTACGCTGA TTTCAACTGC
CTGCTGTTGC CCGAAGACGC CGCCGAGCGT GAAGACGATT ACGTGATGCT CTCGGATATT
TTCCCTACCG GCTGGCACGC CACCGAGCTG GCGGGCCTGT TGCCCGGCGA AAGCGTCGCC
ATCTATGGCG CAGGCCCGGT CGGGCTAATG GCCGTCCACT CGGCAATGAT CAAAGGCGCG
TCGCAGGTAT TTGTCGTGGA CAACCACCCG GATCGCCTCG CGCTTGCAGC GAAGATGGGC
GCCACTCCGA TCAACTCGCT GGAGCAGGGC GCGGTTGACC AGATTCTCAA TCTCACCGAC
GGCCGAGGTA CCGACCGCGG CTGCGAATGC GTCGGTTATC AGTGCTGCGA CCGGCACGGT
CATGAAGCCA ACCACGTCAC CATGAACAAC CTCGTGGCCT CGACCAAGGC CACTGGCGGG
ATCGGCGTCG TGGGCGTCTT TGTACCGCAG GATCCGGGCG CTCACAGCGA CCTGGCGAAG
GAAGGCAAGA TGGCCTTCGA CTTCGGCTCG TTCTGGTTCA AGGGCCAGCA GATCCGTACC
GGTCAGGCCA ACGTCAAGGC CTACAACCGT CGCCTGGCCG AGCTGATCCA CCATGATCGC
GCCAAGCCTT CGCAGATCAT TTCCCATCGC CTGAAGCTAG AAGAAGGCCC GGCTGCCTAC
CAGCACTTCG ATGCTCGTGA CGATGGCTGG ACCAAGGTCG TGCTCAAGCC AAACGGCTGA
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| Protein sequence | MKAIVYNGPR DVSVKNVPDA KIEKPTDALV RVTTTNICGS DLHMYEGRTS FETGRIFGHE
NMGEVIEVGA GVDRVKVGDR VCLPFNIGCG FCENCEKGLT GYCLTANPGS AGAAYGFAEM
GSHEGGQAEL LRVPYADFNC LLLPEDAAER EDDYVMLSDI FPTGWHATEL AGLLPGESVA
IYGAGPVGLM AVHSAMIKGA SQVFVVDNHP DRLALAAKMG ATPINSLEQG AVDQILNLTD
GRGTDRGCEC VGYQCCDRHG HEANHVTMNN LVASTKATGG IGVVGVFVPQ DPGAHSDLAK
EGKMAFDFGS FWFKGQQIRT GQANVKAYNR RLAELIHHDR AKPSQIISHR LKLEEGPAAY
QHFDARDDGW TKVVLKPNG
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