| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2632 |
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| Symbol | |
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| ID | 1184284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2923595 |
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| End bp | 2926390 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394001 |
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| Product | rhodanese domain protein/cystathionine beta-lyase |
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| Protein accession | NP_792440 |
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| Protein GI | 28869821 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
[COG2897] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0811484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA ACATCACCCC GGCGCACCTG CAACAATGGC TGTTCGACGG GCAGGAAATT
GCCCTGTTCG ATGTGCGTGA GCATGGCCAG TATGGCGAAG CGCATCTGTT TCACGGGGTG
ACGCTGCCCT ACAGCCGTCT GGAACTGGAC ATCCGCCGTC TGGCACCGAA CACTGCCGTG
CGCCTGGTGA TTTACGACCA TAGCGGCAGC GATGTCGCAC CGCGAGCAGC CCTGCGACTC
GCTGCGTTGG GCTACGGCAA CGTGCACATT CTGCAGGGCG GCGCGCAGGG CTGGCGAGAA
TCGGGCCGAC AGCTGTTTGC AGGCGTGCAT GTGCCGTCCA AGGCATTTGG CGAGCTGGTC
GAGCAGGTCA GCCACACGCC GCATGTCACG GCCACGCAAC TGGCACAGTG GCAGGCGCGC
GGCGAGCCGC TGGTGGTGCT GGACGGCAGG CCGTTCGATG AGTACCGCAA GATGACCATC
CCAGGTTCCG TGTGCTGCCC CAATGGCGAG CTGGGTTATC GCATTCGGGA ACTGGTTGGC
GATGACAGCA CGCCGATTGT CGTCAACTGC GCCGGGCGCA CACGCAGCAT CATCGGCGCT
CAGACGCTGA TCGATATGGG CCTGAAAAAC CCTGTATATG CACTCGAGAA CGGTACACAG
GGTTGGTACC TGGCCGATCT GCAACTGGAA CACGGCAGTG TCCGGCGCTA CCCGGATGAG
GTGTCCGCAG CGGCGCTGAC CCGACAGCGC AATGCTGCCG AGGCGCTGGC CAGGCGCGCG
CAGGTGCAGA CCGTGACGGG CGGACAAGTG CAGCGCTGGG CTGAGGAGTC CGGTCGCAGC
CTGTTTCTGT GTGATGTACG CAGCGCCGAA GAATTTGCCG CAGGCAGCCT GCCCTGCGCG
CAACACACGC CTGGCGGACA GTTGATTCAG GCCACCGATC TGTACGTTGG GGTGCGCAAC
GCACGGCTGG TGTTGCTGGA CGCCGATGGC ATTCGCGCGC CCATTGTCGC CAGTTGGCTA
AGGCAACTGG GGCATGATGC ATATGTGCTG GCTGACGGCG TCGAGAGCGG CCTGTCGCTG
CCGGTGGCTG AAGCTAACGT GGCCACGGCA GACGTGCCGA TCAGCATTCA GGCACTGGAA
GACGCGTTGA AAGACGCGGC GGTTGCGCTG ATCGATCTGC GTTCCAGCAC GCGCTACCGC
AAGGCACATA TCGACGGCTC GCGCTGGTCG ATTCGCCCGT TGCTCGCAGG TGTTCTGGCG
CAGGAAATCA GGCCGGTGGT GCTGGTCGCC GACGATCCGC TGATTGCGCA ACTGGCCGTG
CAGGAATTGC CTTTGGCGCA GCGTCAGCAG ACTCGCGTGC TTGAAGGCGG CGTTGAGGCC
TGGCAGGCGG CCGGGCGGCC AGTGCGCGAA GGCAGCGCAA GTCTGGCAGA CGAGCACTGT
ATCGATTTTC TGTTCTTCAC CCATGATCGG CACTCGGGCA ACAAGGACGC TGCACGTCAG
TACCTGGCCT GGGAGATAGG CTTGCTGGGG CAAATGACCG CGCAGGAGAT TGCCAGCTTC
AAGCCCCTGC AACTCGAACC GGCGTCTGGC GGGCCGCGCA ATCCGTCGCT GCGCGATCCT
TTGCTACGTA CAAGGCTGGT GCATGCAGCA CGTACGGCCA AGGGCGATGG AATGCGCGGT
GTCAATGTGC CCGTCACGCG TCTGAGTACG GTGCTGTTCG ACAGTTTGAG CGAGATGCGC
GATGTGCGTA AGCGTCGCGA CAGCGAGCGG CTGTTGAGTT ATGGCGCGCG AGGCAATCCG
ACGGGCTTTG CCCTTGAAGA CCTGGTCACC GAGCTGGAAG GTGGTTATCG CACCCGGCTG
TTCAGCAGCG GCCTGGCTGC GGTGGCGCAG ACGTTTCTGG CCTACCTGCG CCCCGGCGAT
CATGTGTTGC TGACCGACGC CGTCTATTCA CCGGTACGCC GTGTGGCGCA GGAGTTTTTG
CAGCCGTTCG GGATCGAGGT CAGCTATTAC GCCGCCGACG GTCGAGGGCT GGAAGCGCAG
TTGCAGGACA ACACACGCAT GGTCTACGCC GAAGTGCCCG GCTCACTGCT GTATGAGCTG
TGCGACCTGC CTGCACTTGC GGCGTTGTGT CGGCCGCGTG GAATTCTGCT GGCGGTGGAC
AACACCTGGG GCAGTGGCTA TCTGTACCGG CCGCTGGCGC TGGGTGCGGA CATTTCCATC
ATGGCCCTGA CCAAATACCT GTGTGGCCAC AGTGATGTGG TGATGGGCAG CGTCTGCACC
CGCGAAGACG TCTGGGCGCC AATTGGACGG ATGGGCGACA CTTTGGGCAA CGCGACCAGC
CCTGATGATG CCTGGCTGAT ACTGCGCGGC GCACGCACGC TGGCCTCGCG CGTGGAGGTG
CATGAGCGCC AGGCGCTGGA GGTCGCGCTG TGGCTTGACG CCCACCCGCA GGTTGGCCGG
GTGTTTCATC CGGGCTTGCC CACACATCCG CAGCATTGGC TGTGGAAGCG CGATTTCAGT
GGCAGTAACG GTCTGCTGTC GTTCGAGTTG CGTGACGATG ATCCCGCATT GGCAGAGCAC
TTCATCGGCG CCTTGCAGCT GTTCGGCCTC GGGGCGTCGT GGGGCGGTTA TGAGAGCCTG
ATCACAGTGG CCGAGCTCAC GGCGCGGAGC AGCGAAGAAG ACAGGCAGCT CAACACCGTG
CTGCGCCTGC ACATCGGCCT GGAGGATGGC TCGGCGCTGA TCGAAGATTT ACAGCGCGGG
TTTTTGGCCT GCATGGAGGC TCGAACGCGA GGATGA
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| Protein sequence | MSQNITPAHL QQWLFDGQEI ALFDVREHGQ YGEAHLFHGV TLPYSRLELD IRRLAPNTAV
RLVIYDHSGS DVAPRAALRL AALGYGNVHI LQGGAQGWRE SGRQLFAGVH VPSKAFGELV
EQVSHTPHVT ATQLAQWQAR GEPLVVLDGR PFDEYRKMTI PGSVCCPNGE LGYRIRELVG
DDSTPIVVNC AGRTRSIIGA QTLIDMGLKN PVYALENGTQ GWYLADLQLE HGSVRRYPDE
VSAAALTRQR NAAEALARRA QVQTVTGGQV QRWAEESGRS LFLCDVRSAE EFAAGSLPCA
QHTPGGQLIQ ATDLYVGVRN ARLVLLDADG IRAPIVASWL RQLGHDAYVL ADGVESGLSL
PVAEANVATA DVPISIQALE DALKDAAVAL IDLRSSTRYR KAHIDGSRWS IRPLLAGVLA
QEIRPVVLVA DDPLIAQLAV QELPLAQRQQ TRVLEGGVEA WQAAGRPVRE GSASLADEHC
IDFLFFTHDR HSGNKDAARQ YLAWEIGLLG QMTAQEIASF KPLQLEPASG GPRNPSLRDP
LLRTRLVHAA RTAKGDGMRG VNVPVTRLST VLFDSLSEMR DVRKRRDSER LLSYGARGNP
TGFALEDLVT ELEGGYRTRL FSSGLAAVAQ TFLAYLRPGD HVLLTDAVYS PVRRVAQEFL
QPFGIEVSYY AADGRGLEAQ LQDNTRMVYA EVPGSLLYEL CDLPALAALC RPRGILLAVD
NTWGSGYLYR PLALGADISI MALTKYLCGH SDVVMGSVCT REDVWAPIGR MGDTLGNATS
PDDAWLILRG ARTLASRVEV HERQALEVAL WLDAHPQVGR VFHPGLPTHP QHWLWKRDFS
GSNGLLSFEL RDDDPALAEH FIGALQLFGL GASWGGYESL ITVAELTARS SEEDRQLNTV
LRLHIGLEDG SALIEDLQRG FLACMEARTR G
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