| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2596 |
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| Symbol | pchB |
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| ID | 1184248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2869947 |
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| End bp | 2870267 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393966 |
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| Product | isochorismate pyruvate-lyase |
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| Protein accession | NP_792405 |
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| Protein GI | 28869786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01803] chorismate mutase related enzymes |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.878016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTTG TGAAGTCTGC ACCTGAGTGT GAAAACCTCG GCGACATACG CCAGGGCATC
GATGAACTCG ACCGGCAGAT TGTGCAAATC CTTGCCCGGC GCCTGACCTA CGTAAAGGCC
GCGACCCGCT TCAAGGCCAG CCAGCAGGCC ATTCCGGCAC CCGATCGGGT GCGCGCAATG
CTCGAAGAGC GACGTCAATG GGCCAATGAT GCAGGTTTGC CCGTCGATGA AACAGAGGAC
TTCTTCAAGG ACCTGATCCA CTGGTTCATC AACCAGCAGA TCACCCATTG GCGAGCGCTG
CACCCGGAGG CTCAGCCATG A
|
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| Protein sequence | MNVVKSAPEC ENLGDIRQGI DELDRQIVQI LARRLTYVKA ATRFKASQQA IPAPDRVRAM
LEERRQWAND AGLPVDETED FFKDLIHWFI NQQITHWRAL HPEAQP
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