| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2571 |
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| Symbol | |
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| ID | 1184223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2839757 |
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| End bp | 2841184 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393942 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_792381 |
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| Protein GI | 28869762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCC GTTCGCATGC CATCGAAAAC GCCACCGAGC AGTTCGACAA CGGCACCTTT
TTCGCCCTGC TCGGCGACAG CGTCGCTTAT CCCACCCAAA GCCAGGAGGC CGCGAGCCTG
CCGGAGCTTT ATCGTTATCT GAACGAATTC ATCACCCCGC ACGTCGAGCG GCTTGGTTTC
AGTGTCAAGG TGCACGACAA CCCGGTGGCC GGACGCGGGC CCTTGATGAT CGCCACCCGC
ATCGAAGACC CGGCGCTGCC GACCCTGCTC AGCTACGGCC ATGGCGATGT GGTGCGCGGC
TATGACGCGC AGTGGCAAGC GGGCCTGTCA CCGTGGAAAG TCGTTGAGCG CGGTGATCGC
TGGTATGGCC GTGGCACGGC GGACAACAAA GGCCAGCACC TGATCAACCT GACCGCCCTG
GAACAGACCC TCAAGGCGCG CGACGGCACG CTGGGTTTCA ACGTCAAACT GCTGCTGGAA
ATGGGCGAAG AAGACGGCTC GCCCGGCCTC AGCGCGTTCT GCCAGGCACA CGCCGAAGAA
CTTGCGGCGG ATATTTTCAT CGCCTCCGAC GGCCCACGTC TGGCAGCCGC GCGCCCTACC
CTGTTTCTCG GCTCGCGAGG AGTGTTCAAC TTCGAGCTGA CGGTGAACCT GCGCGAAGGC
GCGCACCATT CAGGCAACTG GGGTGGGCTG CTGGCCAACC CCGGCATCAT TCTGGCCAAT
GCCATCGCCA GCATGGTCAA TGAGCACGGC CGGGTGAAAG TCGCGGGGCT CATGCCCGCC
GCCATTCCCG AAGCGGTTAA AACTGCGCTG GCGGATATCG AGGTCGGCGG CGGCCCCGGT
GACCCGGACA TCGACCCCGG TTGGGGCGAC CCGGCGCTGT CGCTCAGCGA AAAGGTCTTC
GGCTGGAACA CCCTCGACAT CCTTGCCTTC AAGACCGGCA ACCCGGACGC CCCGGTACAC
GCCATTCCCG GCAAAGCGCA TGCACTGTGC CATATCCGCT TTGTGGTCGA CAGCGACTGC
AACGCCTTTA TCCCGGCGGT GCGTGCCCAT CTGGATGCCA ACGGTTTCAC TCAGGTAGAG
GTCCGGCAGA CGCGCATGGA TGTGATGCAC GCCACGCGTC TGTCACCGGA CAGCCCGTGG
GTCGGCTGGG CGTTGGAGTC GCTGGCCACC ACTACCGGCA AGAAGCCCGC GCTGCTGCCC
AATCTGGGCG GTTCACTGCC CAACGATGTG TTCGCTGAAG TGCTGGGCCT GCCGACGGTC
TGGGTGCCAC ACTCGTACCC GGCGTGCTCG CAACACGCAC CCGACGAGCA TTTGCTGGCG
CCGGTGGTCA AAGAGAGTCT GCAAATCATG GCCGGACTGT TCTGGGACCT GGGAAAGGAC
GGCGCACGGC TGACGCGCGA GCATCGGGCA CAGGAGCTGA GTAAATGA
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| Protein sequence | MSSRSHAIEN ATEQFDNGTF FALLGDSVAY PTQSQEAASL PELYRYLNEF ITPHVERLGF
SVKVHDNPVA GRGPLMIATR IEDPALPTLL SYGHGDVVRG YDAQWQAGLS PWKVVERGDR
WYGRGTADNK GQHLINLTAL EQTLKARDGT LGFNVKLLLE MGEEDGSPGL SAFCQAHAEE
LAADIFIASD GPRLAAARPT LFLGSRGVFN FELTVNLREG AHHSGNWGGL LANPGIILAN
AIASMVNEHG RVKVAGLMPA AIPEAVKTAL ADIEVGGGPG DPDIDPGWGD PALSLSEKVF
GWNTLDILAF KTGNPDAPVH AIPGKAHALC HIRFVVDSDC NAFIPAVRAH LDANGFTQVE
VRQTRMDVMH ATRLSPDSPW VGWALESLAT TTGKKPALLP NLGGSLPNDV FAEVLGLPTV
WVPHSYPACS QHAPDEHLLA PVVKESLQIM AGLFWDLGKD GARLTREHRA QELSK
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