Gene PSPTO_2560 details

Gene Information

• Locus tag: PSPTO_2560
• Symbol: phnH
• ID: 1184212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2827760
• End bp: 2828356
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637393931
• Product: PhnH protein
• Protein accession: NP_792370
• Protein GI: 28869751
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3625] Uncharacterized enzyme of phosphonate metabolism
• TIGRFAM ID: [TIGR03292] phosphonate C-P lyase system protein PhnH

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.37097
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCA TCCTTCTGCA ACCTGCCTTT ACCGACCCCG TACTTGATGC GCAACGCAGC 
TTTCGCATGG CCTTGAAAGC GCTGGCCGGG CCAGGGATCG CGCACACGTT GCCCGCCGGG 
CATCTGCCGC CTGCCTTGCA AGGCCTGGAC AGCGCCACTC ATGCCTTGTG CCTGGCGCTG 
CTGGACCTGG ACACGCCGGT CTGGCTTGCA CCTGCGTTCG ATACCCCGGC CATTCGGGCA 
AACATTGCCT TTCATTGCGC CAGCCCGATT GTCAGTGATC GCCAGGCGGC GCGCTTTGCG 
TTGCTCGACC TGGCCACTGC CCACCATCTG GACGGCTTTG ATACCGGCAA TGACCGTTAC 
CCGGACCAGT CCTGCACCTT GCTGATCCAG CTGCCGAACC TTGAAGGCGG GCCAGCGCTG 
AGCTGGAGCG GCCCCGGCAT CGAACGGCAA AAAACAGTGA GTTTGCCGCT TGAAGCCGGT 
TTCTGGATCG AGCGCGATTC GCGTAACTCA TTTCCCTGCG GGCTGGACGT GTTCTTTCTG 
GCCGGCAAGC AGATGCTCGG TTTGCCACGC AGCACCCGCG TGCAGGAGTG TGCCTGA 

 

Protein sequence

MSAILLQPAF TDPVLDAQRS FRMALKALAG PGIAHTLPAG HLPPALQGLD SATHALCLAL 
LDLDTPVWLA PAFDTPAIRA NIAFHCASPI VSDRQAARFA LLDLATAHHL DGFDTGNDRY 
PDQSCTLLIQ LPNLEGGPAL SWSGPGIERQ KTVSLPLEAG FWIERDSRNS FPCGLDVFFL 
AGKQMLGLPR STRVQECA