| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2523 |
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| Symbol | |
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| ID | 1184175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2786110 |
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| End bp | 2786982 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393896 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_792335 |
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| Protein GI | 28869716 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGT TGACCGAAAT GCGTCAGGGC GGTCGCGGCT ACTGGCTGTC AGCCCCGGCA
CTGGCGCTGT ACATCGGCCT GCTGGTATTG CCGCTGGGCC TGACCCTGCT GCTGTCATTC
AACGTGTTCG ACTATCAGGT CGGGGTGAAA AGCGACGCCT ACACGTTGGC CAATTACACG
GCGGTGCTTA CCGATTCGTA TTTCTATGAA ATCTTCCTGC GCACCTTCTG GATCAGTGCG
CTGGTCACGC TGCTGTGCGT GCTGATAGGC GTACCGGAAG CCTACATTCT GAGCCGTATG
GGCGCCCCGT GGCGCTCGAT TTTCCTGATT CTGATCCTCA CGCCATTATT GATTTCAGTG
GTGGTCCGGG CCTTTGGCTG GAGCCTGTTG CTGGGCGCTG ACGGTCTGAT CAATCAGGCC
ATCCAGTTCA TGGGCGGTCG CCCGGTGAAA CTGCTTTACA CGCCTTTCGC GGTGATCATC
GCGCTGGTGC ACGTGATGCT GCCGTTCATG ATCATTCCGG TCTGGACCTC GCTGCAGAAG
CTCGACCCCA CCGCCGAGCA GGCCGCGCTG TCACTGGGGG CCAGTCAGGC CAAGGTGATG
CGCCTGATCG TCCTGCCACA GGTCATGCCC GGTGTGTTGT CCGGCTCGTT GATTGTCTTC
GGCCTGGCGG CCAGTTCGTT TGCCATTCCC GGCCTGCTCG GCGGTCGACG CCTGAAGATG
GTCGCCACGG TGATCTACGA CCAATACCTC TCGGAACTCA ACTGGCCGAT GGGCGCGACC
CTGGCGGTGG CGCTGCTGCT GGTCAATCTG CTAGTGATGC TGTCCTGGAA CCGCATGCTC
GAAGGCCGTT ACAAGAAAAC CCTGGGGGAA TGA
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| Protein sequence | MSLLTEMRQG GRGYWLSAPA LALYIGLLVL PLGLTLLLSF NVFDYQVGVK SDAYTLANYT
AVLTDSYFYE IFLRTFWISA LVTLLCVLIG VPEAYILSRM GAPWRSIFLI LILTPLLISV
VVRAFGWSLL LGADGLINQA IQFMGGRPVK LLYTPFAVII ALVHVMLPFM IIPVWTSLQK
LDPTAEQAAL SLGASQAKVM RLIVLPQVMP GVLSGSLIVF GLAASSFAIP GLLGGRRLKM
VATVIYDQYL SELNWPMGAT LAVALLLVNL LVMLSWNRML EGRYKKTLGE
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