Gene PSPTO_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2508 
Symbol 
ID1184160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2769761 
End bp2770189 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID637393881 
Producthypothetical protein 
Protein accessionNP_792320 
Protein GI28869701 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.261635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGT CTGCCTCGCA TCCACAGTCT GAAACGGTCG AGTCCATGCT GGCGTTCGTT 
CGTCAGGGGC AAGTGCTGGC CAACGATTGC CCTTCAAGGA TTGTGCTCAA CCACGTTTGC
AGCCGTTGGG GCGTGCTAGT GCTGGTGGTT TTGCGCGGTG GCATGCATCG CTTCAGCGAG
GTACGGCGCA AGATCGGCGG GGTCAGCGAG AAAATGCTCG CGCAAACCCT GCAACACCTG
GAACAGGACG GTTTCGTCAG TCGCAAGTCG CTGCCCGTGG TGCCGCCGCA CGTGCAGTAC
CGGCTCACGC CGATGGGCGA AGAAGTCGCC TTGCAGGTCG AAACCCTGGC GACCTGGATC
GAGACCAATC TGCCACGCAT CATGCAGGCC CGCGAAGCCT CCAACACTGC ACAGACCACG
CCTGCGTGA
 
Protein sequence
MSESASHPQS ETVESMLAFV RQGQVLANDC PSRIVLNHVC SRWGVLVLVV LRGGMHRFSE 
VRRKIGGVSE KMLAQTLQHL EQDGFVSRKS LPVVPPHVQY RLTPMGEEVA LQVETLATWI
ETNLPRIMQA REASNTAQTT PA