Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2508 |
Symbol | |
ID | 1184160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2769761 |
End bp | 2770189 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393881 |
Product | hypothetical protein |
Protein accession | NP_792320 |
Protein GI | 28869701 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.261635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGT CTGCCTCGCA TCCACAGTCT GAAACGGTCG AGTCCATGCT GGCGTTCGTT CGTCAGGGGC AAGTGCTGGC CAACGATTGC CCTTCAAGGA TTGTGCTCAA CCACGTTTGC AGCCGTTGGG GCGTGCTAGT GCTGGTGGTT TTGCGCGGTG GCATGCATCG CTTCAGCGAG GTACGGCGCA AGATCGGCGG GGTCAGCGAG AAAATGCTCG CGCAAACCCT GCAACACCTG GAACAGGACG GTTTCGTCAG TCGCAAGTCG CTGCCCGTGG TGCCGCCGCA CGTGCAGTAC CGGCTCACGC CGATGGGCGA AGAAGTCGCC TTGCAGGTCG AAACCCTGGC GACCTGGATC GAGACCAATC TGCCACGCAT CATGCAGGCC CGCGAAGCCT CCAACACTGC ACAGACCACG CCTGCGTGA
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Protein sequence | MSESASHPQS ETVESMLAFV RQGQVLANDC PSRIVLNHVC SRWGVLVLVV LRGGMHRFSE VRRKIGGVSE KMLAQTLQHL EQDGFVSRKS LPVVPPHVQY RLTPMGEEVA LQVETLATWI ETNLPRIMQA REASNTAQTT PA
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