| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2483 |
|---|
| Symbol | exbD-3 |
|---|
| ID | 1184135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2743322 |
|---|
| End bp | 2743693 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637393856 |
|---|
| Product | TonB system transport protein ExbD |
|---|
| Protein accession | NP_792295 |
|---|
| Protein GI | 28869676 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.316653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAGCG AGATCAACGT CACACCGCTG GTGGACGTGA TGCTGGTGCT GCTGGTGGTG
TTCATTGTCA CCGCGCCGCT GCTGACCAAC TCGATTCCGA TCAACCTGCC CAAGACCGAA
TCGGTTGCAC CGGTAGAGCA GAAAGACCCG CTGGTGGTGA GTATCGACGG GCAGGGCAAG
CTGTTCATCA ACAAGGATGA AATCCAGCCG GACTTACTGG AAACCAATCT CAAGGCCGCC
AAAGAAAAGG CCCCGGAGGT GCGCGTGCAG TTGCAGGCCG ACAATGGCGT GAACTACGGC
GAAGTGGCGC GGGCAATGGC CTCCATCGAG CGTGCCGGGA TTACCAAACT GTCGGTGATC
ACCGCTAAAT AA
|
|---|
| Protein sequence | MLSEINVTPL VDVMLVLLVV FIVTAPLLTN SIPINLPKTE SVAPVEQKDP LVVSIDGQGK
LFINKDEIQP DLLETNLKAA KEKAPEVRVQ LQADNGVNYG EVARAMASIE RAGITKLSVI
TAK
|
|---|
| |