| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2450 |
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| Symbol | soxA-2 |
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| ID | 1184102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2705595 |
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| End bp | 2708501 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393825 |
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| Product | sarcosine oxidase, alpha subunit |
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| Protein accession | NP_792264 |
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| Protein GI | 28869645 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0353624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC CCGCCCGCCT GCCCGCGCCC ATGGGCCTGC TGATCGATCG CAACCAGCCG
CTCACGTTCA GTTTCGACGG TAGAACCTAT CAGGGCCTAC AAGGCGACAG CATTGCCAGC
GCCCTGTTGG CCAACGGTCG TTTTCTGCTT TCGCGCTCGT TCAAATACCG CCGCCCGCGT
GGCCCGCTGA CCATGGCCGG ACAGGACGCC AACAGCCTGA TCCAGTTGCC TCACGAGCCC
AACGTGCTGG CCGATACCTT CGCGCTGCAC GAAGGCCTGC AGGCCAACGG GCAGAACTTC
AACGGCTCGC TGGACAACGA CAAGGATGCG TACCTGGGCA AGTTCTCAAA ATTCATGCCG
GTGGGCTTCT ATTACCGATC CTTCTACAAG CCCAAAGGCA TGTGGAAAAT CTGGGAGCCG
ATCATTCGCA AAAAGGCCGG TCTGGGCGTG CTGGACCTGA ATTTCCAGCC TGAGTATTAC
GACAAGGCCT ATCTGTTCAC TGACCTGGCG GTGATCGGCG CAGGGCCTGC CGGGTTGCAG
GCAGCGCTGA CTGCCGCCAA CGCCGGGGCC CAGGTGTTGC TGATCGAGCA GCAGCCCATT
CTCGGCGGCT CGCTGACCTA CGCGCGCTTC GATATCGACG GCCAGCGTGC CGAACAACTG
CGCCTCGAAC TGGTCGCTGC GGTAGAAGCA CACGACAATA TTCAGGTGCT CAAACAGGCC
ACGTGCAATG CCTGGTTTAC CGACAATTAC CTGCCGGTGA TTCAAGGCAA GCGCCTGTAC
AAAGTGCGCG CCACGCAATG CCTGGTGTGC AGCGGTTCTC TGGATCAGCC GGTGATTTTT
CGTAACAACG ATTTGCCCGG CGTGATGCTG ACCAGCGCCG TGCAGCGCCT GATGAAGCTC
TACGCAGTCA AGCCGGGCAA ACGCGCGGTG GTGCTGACCG GCAATGATGA CGGCTACCTC
GCCGCCCTGG ATTTGCACGA TCAGGGCGTG GAGGTGGTCG CCGTTGCCGA CATGCGCACC
AACCCAGCGG ATCGAGAATT ACAGCTCGCC CTGGAGAAGC GCGGCATCGC GTGCCACATG
AGCACCACGG TCTACGAGGC GCTGCACGAA AAAGGCATGC GCCATGTCAG CGGTGCCGAA
CTGCGCAAGA TCACCGGTCA AGGCCAAGTG GCCAATCATG GCTTGAGTGT CGAGTGCGAC
CTGCTGTGCA TGTCGGGCGG CTACATGCCG GTCTATCAGT TGCTTTGTCA GGCGGGCGGC
AAGCTTGCCT ACGACGATCA ACAGGCCGAA TTCACCCTCA GCGGCCTGCC GCAGAACCTG
GGCATTGCAG GCTCGGTCAA TGGCTATCAC GTGCTGGATA ACGTGCTGGC AGACGCTACC
CATGCCGCCG GCGGAATGCT CTCGGCGCCA GGCCTGGAAC CCAACCAAAA TCCGCCTGCG
TTGCGCCCTG AAGCAAAGGT CAATTTCAGC TGGCCGATCT TCCCGCACCC CAAGGGCAAG
GATTTCGTCG ATTTCGATGA AGACCTGCAA GTGCGCGACA TCGTCAACGC CACGCGCATC
GGCTACCGCG ACATCCAACT GGTCAAACGC TACTCCACGG TCGGCATGGG CCCGTCGCAA
GGCCGCCACT CTGCGCTGCC GACTGCACGC CTGGTGGCGG CGTCAACCCA GCGCAGCATC
AGCGAAACCG GCGTGACTAC GGCGCGTCCG CCCTTCGAGG CCGAGAAACT GGCGCACGTG
GCGGGTCGCG CCTTCGACCC GTACCGCCAG ACGCCCATGC ATCAACGGCA CGTGCAGGCA
GGCGCGAAAA TGATGCCCGC CGGGATCTGG CAGCGCCCGG CGTTCTACGG CAAGCCGTCG
CGACGTGATG CCTGCATGCA GCAGGAAGCC CTGCACGTGC GTAACAAGGT CGGCATCATC
GACGTCTCGA CCCTCGGCGG CCTGGACATA CGCGGCCCGG ACGCCGCCGA GCTACTCAAC
CGTATGTATA CCTTCGCCTT CCTCAAGCAG CCAGTCGGGC GTTCGCGCTA TGCATTGATG
ACCAACGAAC AGGGCGTGGT GATCGATGAC GGCGTGTGTG CACGGTTTGC CGAACAGCAT
TTCTACGTCA CCGCCACCAC CAGCGGCGTG GATCGTATCT ATCAGCAGAT GCTCAAGTGG
AACGCGCAAT GGCGTCTGAA CGTGGACATC ACCAACGTCA CGGCGGCCAT TGCGGCGGTC
AACGTGGCAG GCCCGGATTC ACGCAAGGTG CTGGCGCAGG TGTGCAGCGA TCTTGACCTG
TCTACCGAGG GTTTTCCCTA TCTTGGCGTG CGGCAAGGCA CTGTTGCAGG CATCAAGGCA
CGCTTGCTGC GAGTCGGCTT CGTCGGCGAA CTGGGCTACG AGATCCACGT TGCGGCGCGG
CATGCCCTCA AGCTGTGGGA TGCGCTGAGC GAAGCGGGCA AGGCGTTCGA CATGCGCCCT
TTCGGCGTCG AGACCCAGCG TCTGTTACGC CTTGAAAAAG GCCATGTGAT CATCAGTCAG
GACACCGATG GCATGACGCA TCCCGGCGAG ATCGACATGG GCTGGGCGGT CAGTCGAACC
AAGCCGTTCT TCGTCGGCCG CCGCGCGGTG GACATCCTCG AAGCCTTGCC GCAAAAGCGC
AAACTGGTCG GTTTCACCCT GCCCAAAGCC AGCCCGCTGC CGCTTGAGGG CCATCTGGTG
CTCAAAGGCG CGGACATCAG CGGCAATGTC ACCTCCTGCG AGTACTCGCA AACCCTCGAC
ATGATTATCG GCATGGCCTA CGCCGCGTTC GATCAGAGCA CGCCCGGCCA GCAGATTCCG
ATCCGCGTCG AAGACGGCGT GGTGGTTCAG GCCACCGTCG TGAAACTGCC CTTTTTCGAC
CCTGAAAACC AGCGCCAGGA GCTCTGA
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| Protein sequence | MNTPARLPAP MGLLIDRNQP LTFSFDGRTY QGLQGDSIAS ALLANGRFLL SRSFKYRRPR
GPLTMAGQDA NSLIQLPHEP NVLADTFALH EGLQANGQNF NGSLDNDKDA YLGKFSKFMP
VGFYYRSFYK PKGMWKIWEP IIRKKAGLGV LDLNFQPEYY DKAYLFTDLA VIGAGPAGLQ
AALTAANAGA QVLLIEQQPI LGGSLTYARF DIDGQRAEQL RLELVAAVEA HDNIQVLKQA
TCNAWFTDNY LPVIQGKRLY KVRATQCLVC SGSLDQPVIF RNNDLPGVML TSAVQRLMKL
YAVKPGKRAV VLTGNDDGYL AALDLHDQGV EVVAVADMRT NPADRELQLA LEKRGIACHM
STTVYEALHE KGMRHVSGAE LRKITGQGQV ANHGLSVECD LLCMSGGYMP VYQLLCQAGG
KLAYDDQQAE FTLSGLPQNL GIAGSVNGYH VLDNVLADAT HAAGGMLSAP GLEPNQNPPA
LRPEAKVNFS WPIFPHPKGK DFVDFDEDLQ VRDIVNATRI GYRDIQLVKR YSTVGMGPSQ
GRHSALPTAR LVAASTQRSI SETGVTTARP PFEAEKLAHV AGRAFDPYRQ TPMHQRHVQA
GAKMMPAGIW QRPAFYGKPS RRDACMQQEA LHVRNKVGII DVSTLGGLDI RGPDAAELLN
RMYTFAFLKQ PVGRSRYALM TNEQGVVIDD GVCARFAEQH FYVTATTSGV DRIYQQMLKW
NAQWRLNVDI TNVTAAIAAV NVAGPDSRKV LAQVCSDLDL STEGFPYLGV RQGTVAGIKA
RLLRVGFVGE LGYEIHVAAR HALKLWDALS EAGKAFDMRP FGVETQRLLR LEKGHVIISQ
DTDGMTHPGE IDMGWAVSRT KPFFVGRRAV DILEALPQKR KLVGFTLPKA SPLPLEGHLV
LKGADISGNV TSCEYSQTLD MIIGMAYAAF DQSTPGQQIP IRVEDGVVVQ ATVVKLPFFD
PENQRQEL
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