| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2400 |
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| Symbol | rbsC-2 |
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| ID | 1184052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2649567 |
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| End bp | 2650571 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393776 |
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| Product | ribose ABC transporter, permease protein |
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| Protein accession | NP_792215 |
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| Protein GI | 28869596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCCA AAGCCCCTGT TCATCAGGCC GCCGCAAAAC CGTCAGGCCG TGTGTGGTTG
CTCAAGCTGC TGCCCAACAA TATCGGCGGG CCATTGATTG GTCTGGCCCT GCTGTTAGTC
GTCTTTTCTT TCAGCTCCGA ATTCTTCTTC ACCCTGCGCA ACGGCCTGAA CATTCTTGAT
CAGGTAACAG TGCTGGGCAT TCTCGCCATC GGCATGACAG CGGTGATCGT CATCGGCGGC
ATTGACCTAT CTGTCGGTTC GGTACTGGCG TTTTCGATGA TGATGCTCGG CTGGCTGTAT
CAGGATCAAG GCCTGGCGCT TGGCCTGGCG ATCCCGGTAG CAATAGCAAC TGGCATGCTC
GCAGGCCTGG TGTCCGGCTT GTTGATTACC TACGCCCGAC TGCCCGCTTT CATCGCCACG
CTGACCATGA TGTCGGTCGC CCGCGGCCTG GCAAACATTC TCACCGAGGG CCGGCAGATC
GTCGGTTATC CGGAGTGGTT CACCAGCCTG GCCACGGTTC GTCATTTCGG CTTCTTATCG
GCTACGGTCG GGCTGTTTCT GGTCATGCTG GTGGTGGCCT GGGTATTCCT GCGCTTTCGG
GCCGGTGGTC GCAACCTGTA TGCCATTGGC GGCAGCCCCG AAGTGGCGCG GCTTTCGGGG
ATTAAGGTGC GCGCCATCAC CTTGTGGGTG TACGCCATCA GCGGTGCGCT GGCCGGTATA
GCCGCCGTGA CCATGGCTGC CCGCCTCGAC TCCTCGCAAC CCAGCGCCGG GCTGACGCTG
GAACTGGACG CCATCGCCGC GGTGGTGATC GGCGGTGCCA GCCTCAGCGG CGGTGTCGGC
AGCGTCGGCG GCACGCTGGT CGGTGTGCTG ATCATCGGCG TGCTGCGTAA CGGCCTCAAC
CTGCTCGGTG TGTCGCCCTT CATTCAACAG GTGGTCATCG GCGTAGTGAT TGCCCTTGCT
GTGACCATCG ATACCTTGCG TCGCCGTTCC AACAGTGCTC ATTAA
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| Protein sequence | MDAKAPVHQA AAKPSGRVWL LKLLPNNIGG PLIGLALLLV VFSFSSEFFF TLRNGLNILD
QVTVLGILAI GMTAVIVIGG IDLSVGSVLA FSMMMLGWLY QDQGLALGLA IPVAIATGML
AGLVSGLLIT YARLPAFIAT LTMMSVARGL ANILTEGRQI VGYPEWFTSL ATVRHFGFLS
ATVGLFLVML VVAWVFLRFR AGGRNLYAIG GSPEVARLSG IKVRAITLWV YAISGALAGI
AAVTMAARLD SSQPSAGLTL ELDAIAAVVI GGASLSGGVG SVGGTLVGVL IIGVLRNGLN
LLGVSPFIQQ VVIGVVIALA VTIDTLRRRS NSAH
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