| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2398 |
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| Symbol | rbsA-2 |
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| ID | 1184050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2647023 |
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| End bp | 2648552 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393774 |
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| Product | ribose ABC transporter, ATP-binding protein |
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| Protein accession | NP_792213 |
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| Protein GI | 28869594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.64453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCTG TTCTGGATAA CCCGACGCCC TACAACCCAG AGGTCACCGC TGCGGCGGTG
CTGTGCCTGC GCAACATCGG CAAGTCCTAC GGCCCGGTGC AGGTGCTTTC GCAGATCAAC
GTCGATGTGC GGCCGGGCGA AGTGCTCGCC CTGCTCGGCG AAAACGGCGC AGGCAAATCG
ACCCTGTCGT CGATTATCGC GGGCCTGGTG CAGCCTGAGG CGGGAGGCTC CATGAGCTGG
CTTGGCGAGG ATTACGCGCC TGCCTCGCCG GGCGCGGCGC TGGGTGCCGG TATCGGCCTG
ATTCATCAGG AAATCCGCCT GCTGGCGCAG TTGTCGATTG CCGAGAACAT CTTTGTCGGG
CGGCTGCCGA TGCGCCACGG CAAGGTTGAC CGCGACTACA TGCTGGCGCA GGCGCAAAAA
CAGCTGGAAC GCCTCGGCCT GAATGTGCCG GCTTCGCGCA AGGTCGAGGG TTTGAGCGTC
GCCGCGCAGC AACTGGTCGA GATCGCCAAA GCCCTGACCC TGAACGCACG CCTGCTGATT
CTCGACGAAC CCACGGCGGC CCTTGGCGGT GAAGAAACCG AGCTGCTGTT TCAGCAGGTC
GAGCGCCTCA AGGCCGAAGG CGTGTCGTTC ATTTACATTA GCCATCGTCT GGAGGAAATC
GCGCGGATCG CCGACCGTAT TCTGGTCCTG CGCGACGGCC GACAGATCGC GCTGCACGCC
ACGGCTCAAG TGCCGGTGCG TGAACTGGTC GAGCAGATGG TCGGGCGTAG CCTTGAACGT
ATCTTCCCTG CCCTGCAAGC ACCGCAGGAG CGGGTGATGC TGCAGGTCAA AGACCTCACC
TGCCGCGAGT TCGCCTTGCA CGGTATCTAC TTCAGCGTAC GCGCCGGTGA AGTGTTCGGC
ATCGCCGGAG TGGTCGGCGC AGGCCGTACC GAGCTGATCC GGGTAATTGC CGGTGCGGCC
CAGGATATTC AGGGCCACAT GCAACTGGAT GGCGAAACCG TTCACCTGCG CTCGCCCTCG
CAAGCCATTC AAGCGGGCGT GGTGCTGGTA CCGGAAGACC GCAAACAACA GGGCGTGGTG
GTCGAGCATC GGATTGAAGA CAATCTGGTC TACGGCAACA CCGACCTGCT ACACAGCGGT
AACTGGGTGT TGCCAAAAGG CCTGCACGAA TTCGCTCGCA ACGCTATTTC GCGCCTCGGC
GTAAAAGGTG CGCCCGAGCA GCGCATCGAC AGCCTGTCCG GTGGCAACCA GCAGAAAGTC
ATCATCGCCA AATGGCTGGC CCGTAACCCC AAGGTGTTCA TTCTCGACGA GCCGACCCGA
GGCATCGACG TCGGTGCGCG GGCGGCGATC TACGAGGTGA TCGCCGAGCT GGCAGCCACC
GGCATGGCCG TGATCGTGGT CAGTTCCGAC CTCGACGAAG TGCTGGGCCT GTCGCACCGG
GTCATGGTCA TGAGCCGTGG CAGGCAGATG GGCATCCTTG AACGTGGCGA GGCGACACCG
GTGTCAGTCA TGGAAATGGC CACCGCCTGA
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| Protein sequence | MHAVLDNPTP YNPEVTAAAV LCLRNIGKSY GPVQVLSQIN VDVRPGEVLA LLGENGAGKS
TLSSIIAGLV QPEAGGSMSW LGEDYAPASP GAALGAGIGL IHQEIRLLAQ LSIAENIFVG
RLPMRHGKVD RDYMLAQAQK QLERLGLNVP ASRKVEGLSV AAQQLVEIAK ALTLNARLLI
LDEPTAALGG EETELLFQQV ERLKAEGVSF IYISHRLEEI ARIADRILVL RDGRQIALHA
TAQVPVRELV EQMVGRSLER IFPALQAPQE RVMLQVKDLT CREFALHGIY FSVRAGEVFG
IAGVVGAGRT ELIRVIAGAA QDIQGHMQLD GETVHLRSPS QAIQAGVVLV PEDRKQQGVV
VEHRIEDNLV YGNTDLLHSG NWVLPKGLHE FARNAISRLG VKGAPEQRID SLSGGNQQKV
IIAKWLARNP KVFILDEPTR GIDVGARAAI YEVIAELAAT GMAVIVVSSD LDEVLGLSHR
VMVMSRGRQM GILERGEATP VSVMEMATA
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