| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2303 |
|---|
| Symbol | |
|---|
| ID | 1183954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2548961 |
|---|
| End bp | 2550550 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637393682 |
|---|
| Product | serine/threonine protein kinase, putative |
|---|
| Protein accession | NP_792122 |
|---|
| Protein GI | 28869503 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.42838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACTC CGACCCCGGC ACTGGCGGCC AGCAAGGGCT ATCTGTTTGC CCTTGCCGAC
GGCGTCAGCC AGTGTGCCGA TGGCGCGCTG GCCGCGCAGT CGACGCTGCA GGCGCTGGCA
CTCGACTATT ACTCGACGCC GGAAACCTGG GGCGTGGCGC AGTCGCTTGA TCGCCTGTTG
CTGGCGCAGA ACCGCTGGCT GCTGGCCAAC GGCCTGCTGA CCACCCTCAG CGCTCTGGTG
CTGCGCGGCA GGCGCTTCAC CCTCGCCCAT GTCGGCGACT GCCGGGCTTA TCGCTGGCAG
GCCGGCACGC TCAAACGCAT CAGCGAGGAC CACGTCTGGG AACAGGCCGA TATGCAGCAT
GTGCTCAAGC GCGCGCTGGG CCTGGATCAA TACGTGGTCA TGGATTATCT CGACGGCGAG
CTGTGCGAAG GCGAGCGTCT GTTGCTGGTC AGCGACGGAA TATGGGCAAC CCTCGGCGAC
GCCAGCATCC GCTCGATTCT GACCGAGCAG GACGACCTCG ACTCAGCGGT GAAAACCCTG
GTCAGCGCGG CGCATCTGGC TGGCAGTCAG GACAATGCCA GCGCCCTGCT GATTCAGGTC
GACAGCCTGG GCACAGACGA TCTGGGCGAC ACGTTGCTGC AATTGCAGCA GTGGCCGCTG
CCGCCAACAC TCAAGGTCGG TCAGACCTTT GAAGGCTGGA ACGTCGGCGA CATCGTGGCG
CAATCGCGGC AGTCGATTCT CTATCGGGTA AAGGACGCCC ACGGCCAGCC TTGGCTGCTG
AAGACCCTGC CGACCAGTCG TCATGACGAA GCCGGTGCCG GGCAGGGGCT GTTGCTCGAA
GAGTGGTTTC TGCGCCGGGT CGCCGGGCGG TTTTTCCCCG AGGTTCATTC GCTTGCGCAG
CGTCAGCACC TGTATTACGT GATGCGCGAA TACCCCGGAA GTACGCTGGC TGAGGTCTTC
AGACGCAACG GGCCGTTGCC ACTGGTGCAA TGGCAGGACC TGGCGACTCG TGTGTTACGG
GCCACCGGGC TGTTGCATCG ACGAAATATC ATCCACCGCG ACATCAAACC GGAAAACCTT
CTGCTGGGTA ACGACGGCGA GCTGCGCCTG CTGGATTTCG GCCTGGCGTT CTGCCCGGGC
CTGTCAGCCA CCAATGCCGA GGACCTGCCC GGTACGCCGA GCTACATTGC TCCGGAAGCC
TTCAACGGTG CAGAAGCGCA CCCCAGGCAG GACTTGTATG CCGTTGGTGT GACGCTGTAT
TACCTGTTGA CCGGTCATTA CCCCTACGGC GAAATCGAAG CCTTTCAACA TCGCCGCTTC
GGCACGCCGA TTCCCGCCAG CCGCTATCGA CCCGACCTGC CACAATGGCT GAGCCAGAGC
CTGGACAAAG CCTTGCAGGC CGACCCGGAT CAACGTTACG AAACCCCGGA ACAATGGCTG
CTGGAACTGG AGCAGGCCGA GCATCGCTCA CTGGTTACGC GCCCGCGCCC GTTGCTGGAA
CGCGAACCGC TGAAAGTCTG GCGCACGCTG GCGCTGGTCT CGTTGCTGTG CAATCTGCTG
GCGGTCATCT GGTTCATGGG GCGCCACTGA
|
|---|
| Protein sequence | MVTPTPALAA SKGYLFALAD GVSQCADGAL AAQSTLQALA LDYYSTPETW GVAQSLDRLL
LAQNRWLLAN GLLTTLSALV LRGRRFTLAH VGDCRAYRWQ AGTLKRISED HVWEQADMQH
VLKRALGLDQ YVVMDYLDGE LCEGERLLLV SDGIWATLGD ASIRSILTEQ DDLDSAVKTL
VSAAHLAGSQ DNASALLIQV DSLGTDDLGD TLLQLQQWPL PPTLKVGQTF EGWNVGDIVA
QSRQSILYRV KDAHGQPWLL KTLPTSRHDE AGAGQGLLLE EWFLRRVAGR FFPEVHSLAQ
RQHLYYVMRE YPGSTLAEVF RRNGPLPLVQ WQDLATRVLR ATGLLHRRNI IHRDIKPENL
LLGNDGELRL LDFGLAFCPG LSATNAEDLP GTPSYIAPEA FNGAEAHPRQ DLYAVGVTLY
YLLTGHYPYG EIEAFQHRRF GTPIPASRYR PDLPQWLSQS LDKALQADPD QRYETPEQWL
LELEQAEHRS LVTRPRPLLE REPLKVWRTL ALVSLLCNLL AVIWFMGRH
|
|---|
| |