Gene PSPTO_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2286 
Symbol 
ID1183937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2527650 
End bp2528348 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID637393665 
Producttranscriptional regulator, GntR family 
Protein accessionNP_792105 
Protein GI28869486 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.28962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGACAA CGGAAGACGA CCCGGAAACC CTTTCCGAGA ACGTTTTCCG ACGCATTCAG 
TCGGCCATTG TCAAAGGCGA AATCGCCCCC GGCAGCAAGA TTTCCGAGCC GGAGCTGGCG 
CGCACCTATG GCATCAGTCG CGGCCCGTTG CGTGAAGCGA TCCATCGGCT TGAAGGCCAG 
CGGCTGGTGG TGCGTGTGCC GCATGTGGGC GCCCGTGTGG TCGCGCTCAG CCACGCCGAA 
TTGATCGAGC TGTATGAAAT TCGTGAATCC CTGGAAGGCA TGGCCTGCCG CTTGGCCGCC 
GAACGCATGA GCCAGGCCGA GATTGATGAG TTGCGCAGCG TGCTCGACAC CCATGAACGC 
GATGCGGCGT TCCAGGCGGG CATCGGTTAC TACCAGCAGG AAGGTGATTT CGACTTTCAT 
TACCGGATCA TCCAGGGCAG CGGCAACCGC ACCCTCAGTC AGATGCTCTG CGGTGAGCTT 
TATCAACTGG TGCGCATGTA CCGCATCCAG TTCTCCACCA CGCCCAACCG GCCCCGGCAG 
GCCTTTGCCG AACACCACCG GATTCTCGAC GCCATCGCCG AGCGCGACGG CGAGCTGGCC 
GAATTGTTGA TGCGCCGTCA CATCGGCGCG TCCAGACGCA ACATCGAGCG CCATTATCAG 
GCGGCTTCCC AGGCAACTTC CGACCGAGGT CAACCATGA
 
Protein sequence
MLTTEDDPET LSENVFRRIQ SAIVKGEIAP GSKISEPELA RTYGISRGPL REAIHRLEGQ 
RLVVRVPHVG ARVVALSHAE LIELYEIRES LEGMACRLAA ERMSQAEIDE LRSVLDTHER 
DAAFQAGIGY YQQEGDFDFH YRIIQGSGNR TLSQMLCGEL YQLVRMYRIQ FSTTPNRPRQ 
AFAEHHRILD AIAERDGELA ELLMRRHIGA SRRNIERHYQ AASQATSDRG QP