| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2256 |
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| Symbol | |
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| ID | 1183907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2499048 |
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| End bp | 2500469 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393636 |
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| Product | transglycosylase, SLT family |
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| Protein accession | NP_792076 |
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| Protein GI | 28869457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.52446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAT CCGCGCTTGT GTCTTTTATC TGTCTGCTGG CCTGTTTGCC GTTGCAGGTG
TCTGCACGTC AGTCCGGCCC CGATGCGGTC CAGCACAGCA CGCAGGTCCG CGATCTGCCC
ACCATTCGCA GCAGCAAAGT GTTGAAGGTG CTGGTCAATC AGAGCCGCAA CAGTTCCGGC
GACGTCAAAG GACAGGAAAT CGGCGTCGAA TATCATCGCC TGCAAGCCTT CGAGCAATAC
CTCAACAGCC ATGCCCGCGA CGGACAGAAA GTCACGTTCA AGATCATTCC CAAAGCCAAG
AACCAGCTGT TGACGGCGTT GCAGCGCGGC GAAGGCGACA TGATCGCGCC TGGCGAATTG
CTTGATGTCA GCGAGGCCAA AGGCATCAAG GCCAGCGCGC CGATCGTGCA TGACGTGCCG
CTGGTGCTGG TCGGCGTTCG CGGTCAGCGC AGCCTGCGCC GTGTGGATCA GTTGTCCGGG
CGCACGCTGA GCCTGCCCAA CGGCAGCGCC GCCGATGAAG CCTTGCATCA GGTCAACCGG
CAACTGGAGC TGCGCAAATT GCCGCTGGCG AAAATCGAAT GGGTCGACCC CAGCCTGGCC
GTCGAGGACG TGCTGGAAAT GGTCCAGGCG GGTATTTACC CGATGACCCT GGTCGAGCAA
CCCATTGCTG AACGTTGGGC GAAGATCATG CCTGAGTTGC GCATTGATCG CGGCCTGACC
TTGCCGACTC ACGGTGACAT CAGTTGGTTC GTGCGTGACA ACGCCACCCT GCTGCGCGCC
AGTGTCGACG ACTTTCTCAA GGGATATAAA CCGTCGGCCC AGCAGGACCT GGTGTTCGCC
AAGGCGTACA AGAACACCTA CAAGGTGAAT AATCCACTGG TCAGCAACAA TCGCCAGCGT
CTTGAGCAAC TGCGCCCCAT GCTGCAACGC CACGCTGATG CGCAAGGCAT GGATTGGCTG
GACCTCGCAG CGCTGGCATT CAAGGAGTCC AGGCTCGACC CGGCCGCCAA AGGCAGCGGC
GGCGCGACAG GTCTGTTGCA GATCACGCCG TCTGCGGCGA AAAGTGTCGG CGTGTCGAGC
ATTCAGAGCG CCGACGACAA TGTCCGCGCC GGGTCGCGTT ACATGGCGCA GATCCAGCGC
AAATATTTTT CCAGCTCCCG AGTCAACGAG CGCGAGCGCA TGGCCTTCGT GATGGCGGCC
TACAACCTGG GGCCGGAGCG CGTGCAAGGC ATGCGCGAGG AAGCGCGGCG ACGCGGACTC
AATCCCAACC AATGGTTCTT TCAGACCGAG CGCGTGGCGA TGGAGCAGGG TGGGGCCAAT
GTGGTTGCTT TCGTGAACAG CGTGAACAAG TACTACCTGG CATTTGATCG CGAGCGCGAT
TCGCTGGAAA AGAGCGGTAA CAAAACGGTG GTAAAACGCT AG
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| Protein sequence | MTRSALVSFI CLLACLPLQV SARQSGPDAV QHSTQVRDLP TIRSSKVLKV LVNQSRNSSG
DVKGQEIGVE YHRLQAFEQY LNSHARDGQK VTFKIIPKAK NQLLTALQRG EGDMIAPGEL
LDVSEAKGIK ASAPIVHDVP LVLVGVRGQR SLRRVDQLSG RTLSLPNGSA ADEALHQVNR
QLELRKLPLA KIEWVDPSLA VEDVLEMVQA GIYPMTLVEQ PIAERWAKIM PELRIDRGLT
LPTHGDISWF VRDNATLLRA SVDDFLKGYK PSAQQDLVFA KAYKNTYKVN NPLVSNNRQR
LEQLRPMLQR HADAQGMDWL DLAALAFKES RLDPAAKGSG GATGLLQITP SAAKSVGVSS
IQSADDNVRA GSRYMAQIQR KYFSSSRVNE RERMAFVMAA YNLGPERVQG MREEARRRGL
NPNQWFFQTE RVAMEQGGAN VVAFVNSVNK YYLAFDRERD SLEKSGNKTV VKR
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