| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2230 |
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| Symbol | fimA |
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| ID | 1183881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2458675 |
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| End bp | 2459226 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393611 |
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| Product | type I pilus biogensis protein FimA |
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| Protein accession | NP_792051 |
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| Protein GI | 28869432 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.24181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAA CGCTATCCGC ACTCGGTCTT GCTCTGGCCA CTGCCCTGAC TGGCACCGCC
GTATCTGCCA ACACCGGCAC TATCAACTTT GAAGGCCAGA TCACCGGCAG CACCTGCCCT
ATCGAAGTGG TCAACCCAGG TGACGGTGCA GTTGGCAACC TGGTGAAAAT GGGCTCTGTC
GACGCTGGCC GCTTCACCGC CGTCGGCCAG GAATACAGCG GCAAGAGCTT TGCCCTGCGC
GTCAAAGACA ATGGCAGTTG CGGTCTTACA GGCACCGCCG ATGTTGCAAC TGTAAAGTTT
GACGGTGCCG CGGACGGTTC CAGCAGCTAC TTTGCTGTCA CACCAACGGC AGATGGCGCA
ACGGGCGTCG CCATTGCCAT TCGTGACTTT AGCGGAGACT CTATCGAGCC TGGAACCGAG
TCTGCCCCCT ACCCTCTGGT CGTTGGCGGT GTCACCGACA TGACCTTCGA CGCCTACTAT
CGCTCGACAG CCGCCACAGT GACGCCGGGC ACTGCCTCGG CAGATATCAA CTTCACCGTC
GCCATCAACT GA
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| Protein sequence | MNKTLSALGL ALATALTGTA VSANTGTINF EGQITGSTCP IEVVNPGDGA VGNLVKMGSV
DAGRFTAVGQ EYSGKSFALR VKDNGSCGLT GTADVATVKF DGAADGSSSY FAVTPTADGA
TGVAIAIRDF SGDSIEPGTE SAPYPLVVGG VTDMTFDAYY RSTAATVTPG TASADINFTV
AIN
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