| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2221 |
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| Symbol | |
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| ID | 1183872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2444345 |
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| End bp | 2445394 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393602 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_792042 |
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| Protein GI | 28869423 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0102435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACA ATGATCGTTT GCTGGTGCAG ATTCTGCTGC TGGCGCTATT CGGCGCCTGT
CTCTGGGTAA TGGCACCGTT CTGGTCGGCG CTGGTCTGGG GCGCGGTGCT GGCGTTTGCC
AGTTGGCCGT TGATGCGTTT GCTGACGCGC TGGTTCAAGG GCCGTGAGTC GCTGGCTGCG
CTGGTGATGT GCTTGTGCTG GATGTTGCTG GTCGCGGCAC CACTCGTCTG GCTGGGCTTC
AATCTCGCCG ACCATGTGCG TGACGCCACG GCGTTGATCA AGGATATACA GGTCGACGGG
CTGCCTGATC CGCCGCAATG GCTGGCGGGT ATTCCGCTGG TGGGCGAGCG CCTGGTGGGG
TTGTGGACCA CCATTGACCA GCAGGGCGCG GCGTTCATGA CCACGGTCAA GCCGTACCTG
GGCGAGGTCG GCAACTGGTT GCTGGCGCGC AGCGCGCAGA TCGGTGGCGG CATCCTCGAG
CTGACTCTGA GTATCGTTTT CGCCTTTTTC TTCTATCGCG ACGGTCCGCG TCTGGCGGCG
TTCGTGTTGA GCCTGCTGGA ACGCTTGATC GGTGACAGGG CGCAGTATTA TCTGGACCTG
GTTGCAGGCA CGGTGCAGCG GGTAGTCAAC GGTGTGATTG GCACCGCAGC GGCGCAGGCG
TTGCTCGCGC TGATCGGTTT TCTGATCGCA GGCATTCCTG GAGCGCTGGT GCTGGGCATT
CTGACTTTCC TGTTCAGCCT CATCCCGATG GGCCCGCCGT TGGTCTGGTT GCCTGCAACC
GCCTGGCTGG TTTGGCAGGG CGAGTATGGT ATGGCGATAT TTCTCGGCAT CTGGGGCATG
TTCGTCATCA GTGGCGTGGA CAACGTGCTC AAGCCTTACC TGATCAGTCG GGGCGGCAAT
CTGCCGCTGG TGATTGTGTT ACTGGGGGTG TTTGGCGGGC TGCTGGCGTT CGGCTTCATC
GGCCTGTTCA TCGGCCCGAC CCTGCTGGCG GTGGCGTACA GCCTGTTGAC GGACTGGGTT
GGCAGTGAAC GGGCGCGTAA CCCGCGCTAA
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| Protein sequence | MFNNDRLLVQ ILLLALFGAC LWVMAPFWSA LVWGAVLAFA SWPLMRLLTR WFKGRESLAA
LVMCLCWMLL VAAPLVWLGF NLADHVRDAT ALIKDIQVDG LPDPPQWLAG IPLVGERLVG
LWTTIDQQGA AFMTTVKPYL GEVGNWLLAR SAQIGGGILE LTLSIVFAFF FYRDGPRLAA
FVLSLLERLI GDRAQYYLDL VAGTVQRVVN GVIGTAAAQA LLALIGFLIA GIPGALVLGI
LTFLFSLIPM GPPLVWLPAT AWLVWQGEYG MAIFLGIWGM FVISGVDNVL KPYLISRGGN
LPLVIVLLGV FGGLLAFGFI GLFIGPTLLA VAYSLLTDWV GSERARNPR
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