Gene PSPTO_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2217 
Symbol 
ID1183868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2441614 
End bp2442423 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID637393598 
Producthypothetical protein 
Protein accessionNP_792038 
Protein GI28869419 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.105926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAT CGGTGTTCTT CGCTCACGCC AACGGCTTCC CTTCCGCCAC TTACGGCAAG 
TTGTTCTGCG CGTTGGCGCC GGAATATCAA GTGGCCCACC TTGAGCTGCA TGCTCACGAC
CCGCGTTTTC CGGTGGATGA CAACTGGTTG AACCTGGTGG ATGAGCTGAT CCATCACCTG
CGCGAGCAGG CCGGTCCGGT ATGGGGCGTG GGGCACTCGC TTGGCGGAGT GCTGCATTTT
CATGCCGCGC TGCGTTGCCC TGAGCTGTAC CGTGGGGTAG TGATGCTTGA TTCTCCGGTG
CTGGGGCTGG CGGACAAGCT GTTCATCCGC GCAGCCAAAC GCCTTGGTTT CATTGACCGC
ATCACCCCGG CAGGTCGCAC ACTGGGCCGT CGTGATGCCT TCGCCGACCT TGATGCGGCC
CGTACTTATT TTGCCAGCAA AACCTTGTTT CGCCGGTTCG ACCCCGACTG CCTGACGGCA
TACCTGCAAC ACGGCTTACA GCAGGACGGC GAGCAACTGC GTCTGCGCTT CGATCCGGCG
ACAGAGATCA GCATCTATCG CAGCATTCCC CACACCAGCC CGTTGCCGTC GCGTCAGCTC
AAGGTGCCGC TGGCGATGGT GCGCGGCAAG CACAGCCGGG TCATCATGCC GCATCATGGC
TATCTGGCCC GGCGTATGCG CGATGGCGAA TACCTGTCCA TGCCCGGAGG GCACATGTTT
CCACTGGAAC GCCCCGATGA AACGGCGCAG TTACTCAAAT CGCTGTTCGC ACGCTGGGAT
GCGCGACAGC TGCAACGGGC GGGCGCATGA
 
Protein sequence
MSQSVFFAHA NGFPSATYGK LFCALAPEYQ VAHLELHAHD PRFPVDDNWL NLVDELIHHL 
REQAGPVWGV GHSLGGVLHF HAALRCPELY RGVVMLDSPV LGLADKLFIR AAKRLGFIDR
ITPAGRTLGR RDAFADLDAA RTYFASKTLF RRFDPDCLTA YLQHGLQQDG EQLRLRFDPA
TEISIYRSIP HTSPLPSRQL KVPLAMVRGK HSRVIMPHHG YLARRMRDGE YLSMPGGHMF
PLERPDETAQ LLKSLFARWD ARQLQRAGA