Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2217 |
Symbol | |
ID | 1183868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2441614 |
End bp | 2442423 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393598 |
Product | hypothetical protein |
Protein accession | NP_792038 |
Protein GI | 28869419 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.105926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAT CGGTGTTCTT CGCTCACGCC AACGGCTTCC CTTCCGCCAC TTACGGCAAG TTGTTCTGCG CGTTGGCGCC GGAATATCAA GTGGCCCACC TTGAGCTGCA TGCTCACGAC CCGCGTTTTC CGGTGGATGA CAACTGGTTG AACCTGGTGG ATGAGCTGAT CCATCACCTG CGCGAGCAGG CCGGTCCGGT ATGGGGCGTG GGGCACTCGC TTGGCGGAGT GCTGCATTTT CATGCCGCGC TGCGTTGCCC TGAGCTGTAC CGTGGGGTAG TGATGCTTGA TTCTCCGGTG CTGGGGCTGG CGGACAAGCT GTTCATCCGC GCAGCCAAAC GCCTTGGTTT CATTGACCGC ATCACCCCGG CAGGTCGCAC ACTGGGCCGT CGTGATGCCT TCGCCGACCT TGATGCGGCC CGTACTTATT TTGCCAGCAA AACCTTGTTT CGCCGGTTCG ACCCCGACTG CCTGACGGCA TACCTGCAAC ACGGCTTACA GCAGGACGGC GAGCAACTGC GTCTGCGCTT CGATCCGGCG ACAGAGATCA GCATCTATCG CAGCATTCCC CACACCAGCC CGTTGCCGTC GCGTCAGCTC AAGGTGCCGC TGGCGATGGT GCGCGGCAAG CACAGCCGGG TCATCATGCC GCATCATGGC TATCTGGCCC GGCGTATGCG CGATGGCGAA TACCTGTCCA TGCCCGGAGG GCACATGTTT CCACTGGAAC GCCCCGATGA AACGGCGCAG TTACTCAAAT CGCTGTTCGC ACGCTGGGAT GCGCGACAGC TGCAACGGGC GGGCGCATGA
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Protein sequence | MSQSVFFAHA NGFPSATYGK LFCALAPEYQ VAHLELHAHD PRFPVDDNWL NLVDELIHHL REQAGPVWGV GHSLGGVLHF HAALRCPELY RGVVMLDSPV LGLADKLFIR AAKRLGFIDR ITPAGRTLGR RDAFADLDAA RTYFASKTLF RRFDPDCLTA YLQHGLQQDG EQLRLRFDPA TEISIYRSIP HTSPLPSRQL KVPLAMVRGK HSRVIMPHHG YLARRMRDGE YLSMPGGHMF PLERPDETAQ LLKSLFARWD ARQLQRAGA
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