Gene PSPTO_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2205 
Symbol 
ID1183856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2429130 
End bp2429711 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content61% 
IMG OID637393586 
Producthypothetical protein 
Protein accessionNP_792026 
Protein GI28869407 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.547668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATGC CCGAAACGAA AACCCGGTCT GTAGCCCTCA CCCCGCCCCT GCACACGCCA 
CGTCTGCTCC TGCTGCCACT GCAACTCGAA GACGCGCCCG CCATGCAGAG CCTGTTCAAC
CACTGGGAGG TCGTGCGCTA CCTGACCCAT CACGTGCCCT GGCCCTATCC AGAAGGCGAA
GCACTGCGCT ACCTGCGCGA AGACGCTCTG CCTGCGATGC AGGACGGGGA AGAATGGCAT
TGGTCGATTC GTCTGCGCAG CCAACAGGAC CGCTTGATCG GCAGTGCCTG CATGATGGAC
GAGCAGGATA ACAACCGTGG CTTCTGGCTT TCACCGGCCT ATCAGGGGCT GGGGCTGATG
TCAGAGGTCT GCGTGGCGAT TGATCGCTTC TGGTTTGAAA CACTCAAACG CCCTGTTCTG
CGCGTGGCCA AGTGCGCCTT GAATGAAGCG TCCTGCCGCC TGTCGCAGCG CGAAGGCATG
CGCCTTGTGA CCGTTCAGGA ATCGCAGTTT GTCTGCGGCA CGACGCAGGA ACAGCTATGG
GAATTGACGC GGGACGAATG GCGGGCAAAT AACGGCGGTT AG
 
Protein sequence
MSMPETKTRS VALTPPLHTP RLLLLPLQLE DAPAMQSLFN HWEVVRYLTH HVPWPYPEGE 
ALRYLREDAL PAMQDGEEWH WSIRLRSQQD RLIGSACMMD EQDNNRGFWL SPAYQGLGLM
SEVCVAIDRF WFETLKRPVL RVAKCALNEA SCRLSQREGM RLVTVQESQF VCGTTQEQLW
ELTRDEWRAN NGG