| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2172 |
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| Symbol | |
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| ID | 1183823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2391713 |
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| End bp | 2392585 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393554 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791994 |
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| Protein GI | 28869375 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG CCAATCTCAA CGCCTTTATA GCCATCGCCG AGACCGGCAG CTTCTCGGGT
GCCGGTGAGC GGCTGTACAT CACCCAGCCT GCCATCAGCA AGCGCATCGC CGGTCTGGAG
CAGCAGCTCA ACGTGCGCCT GTTTGATCGC CTGGGCCGCG AAGTCAGCCT GACCGAGGCC
GGTCGCGCCC TGCTGCCGCG CGCCTACCAG ATCCTCAATG TGCTGGACGA CACGCGCCGC
GCACTGACCA ACCTGACCGG CGAAGTCAGC GGCCGGCTGA CCCTGGCAAC CAGTCACCAC
ATCGGCCTGC ATCGCCTGCC GCCGGTGCTG CGGGCGTTTA CCCGTGCCTA CCCCAAGGTT
GCGCTGGACA TTCAGTTTCT CGATTCGGAG GTGGCTTATG AGGAAATTCT TCACGGGCGC
GCCGAGCTGG CAGTCATTAC ACTGGCGCCC GAGCCCCATG CGTTGATCCG CGCCATGCCT
GTGTGGGACG ACCCGCTGGA CTTCGTCGCC GCGCCGGAGC ACCCGCTGGC CAACAGCGGG
CCGATGCAAC TGGCGGATAT CGTGCGTTAC CCGGCGGTGT TTCCGGGCAG CAAAACGTTC
ACCCACCACA TTGTCAGCGG GCTGTGCGAG GCCGAGGGCC TGAAGCCCAA TATAGCCATG
AGCACCAACT ACATGGAGAC CATCAAGATG ATGGTCTCCA TCGGCCTGGC CTGGAGCGTA
CTGCCGCGCA CCATGCTCGA CGAACAGGTG GCGCGCATTC CTTTGCCGGG CGTGCAGCTC
AATCGCCAGC TAGGCTACAT CCTGCACACC GAACGCACGC TGTCGAATGC CGCCAGAGCA
TTCATGAAAT TGCTCGATGC GCAGACACAG TGA
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| Protein sequence | MDLANLNAFI AIAETGSFSG AGERLYITQP AISKRIAGLE QQLNVRLFDR LGREVSLTEA
GRALLPRAYQ ILNVLDDTRR ALTNLTGEVS GRLTLATSHH IGLHRLPPVL RAFTRAYPKV
ALDIQFLDSE VAYEEILHGR AELAVITLAP EPHALIRAMP VWDDPLDFVA APEHPLANSG
PMQLADIVRY PAVFPGSKTF THHIVSGLCE AEGLKPNIAM STNYMETIKM MVSIGLAWSV
LPRTMLDEQV ARIPLPGVQL NRQLGYILHT ERTLSNAARA FMKLLDAQTQ
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