Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2168 |
Symbol | |
ID | 1183819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2387378 |
End bp | 2387839 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393550 |
Product | 4-hydroxybenzoyl-CoA thioesterase domain protein |
Protein accession | NP_791990 |
Protein GI | 28869371 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.33249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTGGG ATCGGGCAAC GCCTTTCGTC ATTGACCTGA ACGTCGGCGC CGAAGACATT GATGGGCTGG GGCATGCCAA TAATGCCGTG TATGTCTCCT GGCTGGAGCG CTGCGCCTGG CGGCATTCGC AGTTTCTGGG CCTGGACCTG ACCGAATATC AGCGTCTGGA CCGGGCCATG GCAGTGGTCA GGCACGAGAT CGACTACCTG GCCAGCGCCT ACGAAAGCGA CGAACTGCAA CTGGCAACCT GGATCACCGA CTGGGATCGC CGTCTGAAAA TGACCCGCTG CTTTCAGCTC AAGCGGCCTG CCGACAACCT GACGCTATTA CGCGCGCAAA CCACCTTTGT CTGCATCGAA CTGTCCAGCG GTCGGCCCAA ACGCATGCCC GCCGAGTTCA TCGAAGGCTA CGGTGCAGCC ATTCCCGACA GCGACGTTCC CAATCCGCAC GCCGGGCAGT AA
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Protein sequence | MVWDRATPFV IDLNVGAEDI DGLGHANNAV YVSWLERCAW RHSQFLGLDL TEYQRLDRAM AVVRHEIDYL ASAYESDELQ LATWITDWDR RLKMTRCFQL KRPADNLTLL RAQTTFVCIE LSSGRPKRMP AEFIEGYGAA IPDSDVPNPH AGQ
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