Gene PSPTO_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2168 
Symbol 
ID1183819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2387378 
End bp2387839 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID637393550 
Product4-hydroxybenzoyl-CoA thioesterase domain protein 
Protein accessionNP_791990 
Protein GI28869371 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.33249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTGGG ATCGGGCAAC GCCTTTCGTC ATTGACCTGA ACGTCGGCGC CGAAGACATT 
GATGGGCTGG GGCATGCCAA TAATGCCGTG TATGTCTCCT GGCTGGAGCG CTGCGCCTGG
CGGCATTCGC AGTTTCTGGG CCTGGACCTG ACCGAATATC AGCGTCTGGA CCGGGCCATG
GCAGTGGTCA GGCACGAGAT CGACTACCTG GCCAGCGCCT ACGAAAGCGA CGAACTGCAA
CTGGCAACCT GGATCACCGA CTGGGATCGC CGTCTGAAAA TGACCCGCTG CTTTCAGCTC
AAGCGGCCTG CCGACAACCT GACGCTATTA CGCGCGCAAA CCACCTTTGT CTGCATCGAA
CTGTCCAGCG GTCGGCCCAA ACGCATGCCC GCCGAGTTCA TCGAAGGCTA CGGTGCAGCC
ATTCCCGACA GCGACGTTCC CAATCCGCAC GCCGGGCAGT AA
 
Protein sequence
MVWDRATPFV IDLNVGAEDI DGLGHANNAV YVSWLERCAW RHSQFLGLDL TEYQRLDRAM 
AVVRHEIDYL ASAYESDELQ LATWITDWDR RLKMTRCFQL KRPADNLTLL RAQTTFVCIE
LSSGRPKRMP AEFIEGYGAA IPDSDVPNPH AGQ