Gene PSPTO_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2132 
Symbol 
ID1183779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2305545 
End bp2306069 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content57% 
IMG OID637393510 
Producthypothetical protein 
Protein accessionNP_791954 
Protein GI28869335 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA AATTGACCGC CCTGGCCCTG TTGCTGGCTG TGAGTGCACC GATGGTTCAG 
GCTGCTGCCG AGCCGTCCGG CTACACCTAC CGCATGGTCG CCGAGGCGCC AAGCAGCGTG
AATGACAAGG AAATTGCCGG TCTGTTTGAT CGCTGGAACA AAGCCTTGCA GACCGGTAAC
CCGAAGACAG TCGCCTCGTT GTATGCACAG GATGCAGTCT TGCAGCCTAC GGTCTCCAAC
AAGGTACGTG CTACCCCGGC TGAGATCACC GACTACTTTG ATCACTTCCT GGTGCTCAAG
CCGGTTGGCG AGATCAACTA CCGGGAGATC CGTCGCCTGG GGCCTGATGC AGCAGCGGAC
AACGGTGTCT ACACCTTCAC CCTGACAGCG GCAGACGGCA AAAAAACCAA GGTGCAGGCA
CGTTATTCGT TCCTTTACCA CCGCATCGGC AACGAGTGGA AGATTCTCAA CCACCACTCT
TCGGCCATGC CGGAAATACA GCCTGAGTAC CAGGTCAGCC GCTGA
 
Protein sequence
MKTKLTALAL LLAVSAPMVQ AAAEPSGYTY RMVAEAPSSV NDKEIAGLFD RWNKALQTGN 
PKTVASLYAQ DAVLQPTVSN KVRATPAEIT DYFDHFLVLK PVGEINYREI RRLGPDAAAD
NGVYTFTLTA ADGKKTKVQA RYSFLYHRIG NEWKILNHHS SAMPEIQPEY QVSR