Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2132 |
Symbol | |
ID | 1183779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2305545 |
End bp | 2306069 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393510 |
Product | hypothetical protein |
Protein accession | NP_791954 |
Protein GI | 28869335 |
COG category | [S] Function unknown |
COG ID | [COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold |
TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGA AATTGACCGC CCTGGCCCTG TTGCTGGCTG TGAGTGCACC GATGGTTCAG GCTGCTGCCG AGCCGTCCGG CTACACCTAC CGCATGGTCG CCGAGGCGCC AAGCAGCGTG AATGACAAGG AAATTGCCGG TCTGTTTGAT CGCTGGAACA AAGCCTTGCA GACCGGTAAC CCGAAGACAG TCGCCTCGTT GTATGCACAG GATGCAGTCT TGCAGCCTAC GGTCTCCAAC AAGGTACGTG CTACCCCGGC TGAGATCACC GACTACTTTG ATCACTTCCT GGTGCTCAAG CCGGTTGGCG AGATCAACTA CCGGGAGATC CGTCGCCTGG GGCCTGATGC AGCAGCGGAC AACGGTGTCT ACACCTTCAC CCTGACAGCG GCAGACGGCA AAAAAACCAA GGTGCAGGCA CGTTATTCGT TCCTTTACCA CCGCATCGGC AACGAGTGGA AGATTCTCAA CCACCACTCT TCGGCCATGC CGGAAATACA GCCTGAGTAC CAGGTCAGCC GCTGA
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Protein sequence | MKTKLTALAL LLAVSAPMVQ AAAEPSGYTY RMVAEAPSSV NDKEIAGLFD RWNKALQTGN PKTVASLYAQ DAVLQPTVSN KVRATPAEIT DYFDHFLVLK PVGEINYREI RRLGPDAAAD NGVYTFTLTA ADGKKTKVQA RYSFLYHRIG NEWKILNHHS SAMPEIQPEY QVSR
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