Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2088 |
Symbol | |
ID | 1183734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2257716 |
End bp | 2258114 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393466 |
Product | hypothetical protein |
Protein accession | NP_791911 |
Protein GI | 28869292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0170245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCATC GAGACTGGAC CACGCGTCTG AACGAAGTAA TCAAGGCTGC CCAAGGGCGG CCTTTTTTGT GGGGCGAATT TGACTGTTGC CTGTTCGCCG CCGACTGCTC GAGCGCCGTG TGCGGTGTCG ATCCTGCAGA GCAATACCGA GGCACCTACA AGACCGAGGC GGGTGCCAAG CGTGCGCTGA AGAAGCGTCA CGGCAGCCTG GAATCTGCAT GGGATGCCTG CTTTGCAAGG GTGGCAGTCC CGTTCATCCA GCGCGGCGAC GTCGTGATGT ACGAAGCACC AGCAGGTCGC AGCATGGCCG TGTTCTGGGC GGGTGATTAC TGGGCAACGA CCGATGACGG CGTTGCTCGA GTTGTGTGTG AGCCGTTGTC AGCCTGGAGG GTTGAATAA
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Protein sequence | MRHRDWTTRL NEVIKAAQGR PFLWGEFDCC LFAADCSSAV CGVDPAEQYR GTYKTEAGAK RALKKRHGSL ESAWDACFAR VAVPFIQRGD VVMYEAPAGR SMAVFWAGDY WATTDDGVAR VVCEPLSAWR VE
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