Gene PSPTO_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2065 
Symbol 
ID1183710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2245666 
End bp2246355 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID637393443 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionNP_791888 
Protein GI28869269 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0898876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATC TGGTCTCGTA CCATCTGGAC GACGGCGTCG CTACGCTGAC CCTGAACAAC 
GGCAAGGTCA ATGCCATTTC CCCGGACGTG ATAATTGCGT TCAATGCCGC ACTGGATCAG
GCCGAAAAGG ATCGCGCCAT CGTGATCGTG ACGGGGCAGC CCGGCATTCT CTCGGGCGGT
TACGACCTAA AGGTCATGAC CTCGAGTGCC GAAGCTGCCA TTAATCTGGT TGCTCAGGGC
TCTACCCTGG CGCGGCGCAT GCTGTCGCAC CCCTTCCCGA TCATCGTCGC CTGCCCAGGC
CATGCCGTCG CCAAGGGCGC TTTTTTGCTG CTGTCAGCCG ATTATCGAAT CGGCGTCGCA
GGCCCGTTCA GCATAGGGCT CAACGAAGTT CAGATCGGCA TGACCATGCA CCACGCCGGT
ATCGAACTGG CCCGCGACCG GCTGCGTAAA TCCGCATTCA ACCGCTCGGT GATCAATGCC
GAAATGTTCG ACCCCGAGGG CGCGATGGCA GCGGGTTTTC TGGACAAGGT GGTCAGCGTC
GAAGAGCTGC AGGGTGCCGC GCTTGCCGTC GCGGCACAAT TGAAGAAAAT CAACATGAAC
GCGCACAAGA AAACCAAGCT CAAGGTCAGA AAAGGTTTGC TCGACACCCT CGATGCAGCC
ATTGAGCAAG ACCGCCAACA CATGCTTTGA
 
Protein sequence
MSDLVSYHLD DGVATLTLNN GKVNAISPDV IIAFNAALDQ AEKDRAIVIV TGQPGILSGG 
YDLKVMTSSA EAAINLVAQG STLARRMLSH PFPIIVACPG HAVAKGAFLL LSADYRIGVA
GPFSIGLNEV QIGMTMHHAG IELARDRLRK SAFNRSVINA EMFDPEGAMA AGFLDKVVSV
EELQGAALAV AAQLKKINMN AHKKTKLKVR KGLLDTLDAA IEQDRQHML