Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2065 |
Symbol | |
ID | 1183710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2245666 |
End bp | 2246355 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393443 |
Product | enoyl-CoA hydratase/isomerase family protein |
Protein accession | NP_791888 |
Protein GI | 28869269 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0898876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATC TGGTCTCGTA CCATCTGGAC GACGGCGTCG CTACGCTGAC CCTGAACAAC GGCAAGGTCA ATGCCATTTC CCCGGACGTG ATAATTGCGT TCAATGCCGC ACTGGATCAG GCCGAAAAGG ATCGCGCCAT CGTGATCGTG ACGGGGCAGC CCGGCATTCT CTCGGGCGGT TACGACCTAA AGGTCATGAC CTCGAGTGCC GAAGCTGCCA TTAATCTGGT TGCTCAGGGC TCTACCCTGG CGCGGCGCAT GCTGTCGCAC CCCTTCCCGA TCATCGTCGC CTGCCCAGGC CATGCCGTCG CCAAGGGCGC TTTTTTGCTG CTGTCAGCCG ATTATCGAAT CGGCGTCGCA GGCCCGTTCA GCATAGGGCT CAACGAAGTT CAGATCGGCA TGACCATGCA CCACGCCGGT ATCGAACTGG CCCGCGACCG GCTGCGTAAA TCCGCATTCA ACCGCTCGGT GATCAATGCC GAAATGTTCG ACCCCGAGGG CGCGATGGCA GCGGGTTTTC TGGACAAGGT GGTCAGCGTC GAAGAGCTGC AGGGTGCCGC GCTTGCCGTC GCGGCACAAT TGAAGAAAAT CAACATGAAC GCGCACAAGA AAACCAAGCT CAAGGTCAGA AAAGGTTTGC TCGACACCCT CGATGCAGCC ATTGAGCAAG ACCGCCAACA CATGCTTTGA
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Protein sequence | MSDLVSYHLD DGVATLTLNN GKVNAISPDV IIAFNAALDQ AEKDRAIVIV TGQPGILSGG YDLKVMTSSA EAAINLVAQG STLARRMLSH PFPIIVACPG HAVAKGAFLL LSADYRIGVA GPFSIGLNEV QIGMTMHHAG IELARDRLRK SAFNRSVINA EMFDPEGAMA AGFLDKVVSV EELQGAALAV AAQLKKINMN AHKKTKLKVR KGLLDTLDAA IEQDRQHML
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