| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1996 |
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| Symbol | |
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| ID | 1183641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2179397 |
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| End bp | 2181868 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393374 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | NP_791819 |
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| Protein GI | 28869200 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.369514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCGC TCAACCGCCC CACGACGCCC TGCTACCACT GCGCCCTGCC CGTGCCGGCC
GGCAAGCGCT TCAACGCCGT GGTGCTCGGT GAAACCCGTG AGCTGTGCTG CCCAGGCTGT
CAGGCGGTCA CCCAAGCCAT CGTTACGAGC GGTCTGGAAA GCTATTACCG CCATCGCAGT
GAAACATCAG CCAACCCGCA AAGCCTGCCC GCGCAATTGA TCGATGAGCT GGCGCTCTAC
GACCGCCCTG ACGTTCAGGC ACCGTTCGTG CGCCACGAAG GCGAATTGTC CGAAGCCATT
CTGCTGATCG AGGGCATCAG TTGCGCAGCC TGCGGCTGGT TGATCGAAAA GCGTCTGGGC
CGGTTGCCGG CTGTTGCCGA GGCGCGCATG AACCTCTCGA CGCATCGTCT GCAGGTGCGC
TGGCGCAGCG ATCAACTGGC CCTCAGCCAA CTGCTGAGCG AACTGCACGC CATCGGTTAC
GTCGCCCATC CGTGGCAGGC CGACCGCGCT GCCGAACGGT TGGCGAGTGA AAATCGCCTG
GCCTTGCGGC AACTGGGCGT CGCCGGCCTA CTGTGGTTTC AGGCAATGAT GGCAACCATG
GCCACCTGGC CTGAGTTCAA CATCGACCTC AGCCCGCAGA TGCACACCAT CCTGCGCTGG
GTGGCGCTGT TTCTGACCAC GCCTATCGTG TTCTACAGTT GCGCGCCGTT CTTTCGCGGT
GCCTTGCGTG ACCTGCGCAA CCGCCAACTG ACGATGGACG TTTCGGTGTC GCTGGCCATA
GGCGCAGCCT ATGTGGCAGG CATCTGGACC GCAATCACCG GCACAGGCGA GCTGTATTTC
GATGCCGTCG GCATGTTCGC CCTGTTTCTG CTGGCCGGGC GCTATCTGGA ACGCCGGGCC
CGGGAGCGCA CCGCCGCGGC CACCGCGCAA CTGGTCAATC TGCTGCCTGC CTCATGCCTG
CGCCTTGATG AGGACGGCCA AAGCCCGCGC ATCATGCTCA GTGAGCTGCG TTTGGCTGAC
CGGGTACTGG TGCGGCCCGG TGCGGTGATT CCAGCTGACG GCACCATTGT CGAGGGTCAA
TCCAGTGTCG ATGAGTCGCT GCTGACCGGC GAATACCTGC CACAGGCACG CAGTGTGGGC
GATGCGGTCA CTGCCGGGAC GCTGAATGTC GACAGTCCGC TGACCGTCAA GGTGACGGCG
CTGGGTCAGG AAACCCGTCT TTCGGCCATT GTTCGCCTGC TAGAACGCGC CCAGGCAGAA
AAGCCCCGCC TCGCACAACT GGCCGACCGG GCGGCGCAGC TTTTTTTGCT GTTTTCGCTG
ATGGCTGCTG CGCTGATCGG GGTAATCTGG TGGCAGATCG ACGCATCACG GGCGTTCTGG
ATTGTGCTGG CAATGCTGGT CGCCACCTGC CCCTGCGCGC TGTCGCTGGC AACCCCGACA
GCCCTGACCG CAGCCACCGG CACACTGCAC ACACTCGGCC TGCTGTTGAC CCGTGGTCAT
GTGCTGGAAG GCCTGAATCA GATCGACACG GTCATCTTCG ACAAGACCGG CACCCTGACC
GAAGGGCGCC TGGTGCTGCG CAGCGTTCAG CCGCTGGGCA CGCTCGACGC TGACACCTGC
ATGGAACTGG CAGCGGCGCT GGAAAACCGC TCCGAGCACC CCATCGCGCG CGCCTTTGGC
CATGCACCTG TGGCCGCTGA AGACGTGCAC AGCACACCGG GGCTGGGCCT TGAAGGCATT
GTCGGTACCC GCCGCTTGCG CATCGGTCAG CCGGCTTTTG CCTGCGCCCT GAGCGGCACT
GAAACGCTGT CGATAACAGA CCCATCCGGG CAGTGGCTGC TGCTCGGCGA CACCCAAGGC
CCTCTGGCAT GGTTGGTGCT GGACGACCGA CTTCGCGACG ATGCGCATGG CTTGTTACAC
GCCTGCAAGG CCCGTGGCTG GAAAACCCTG CTGCTGTCCG GCGACAGTTC GCCCATGGTT
GCCAGCGTCG CGCAGGTACT GGGTATCGAA GACGCCCGTG GCGGCTTGCG TCCCGACGAT
AAACTGGCCG TGCTGCGGGA GCTGCAGGCT CAGGGGCATA AAGTGCTGAT GGTCGGTGAC
GGCGTGAACG ACGTACCGGT CATGGCCGCT GCCGACATCA GCGTGGCGAT GGGCTCGGCC
ACTGACCTTG CAAAAACCAG CGCCGACGCC GTCTTGCTCT GCAACCGCTT GCCGGTGCTG
ATCGACGCAT TGACCCTGGC CCGACGTACC CGGCGCATCA TTATCGAAAA CCTGGTCTGG
GCCGGTCTGT ACAATGGCCT CATGTTGCCG TTCGCAGCGC TGGGCTGGAT CACCCCGATC
TGGGCAGCGA TTGGCATGTC GGTCAGTTCC TTGATCGTGG TGCTCAACGC ACTGCGCCTG
ACCCGCGTGC CGCGCGCTGC ACACCTGTCG CAAACCGCCC CGGAGGTTTC ATGCCCGCGC
TTTACATCAT GA
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| Protein sequence | MTALNRPTTP CYHCALPVPA GKRFNAVVLG ETRELCCPGC QAVTQAIVTS GLESYYRHRS
ETSANPQSLP AQLIDELALY DRPDVQAPFV RHEGELSEAI LLIEGISCAA CGWLIEKRLG
RLPAVAEARM NLSTHRLQVR WRSDQLALSQ LLSELHAIGY VAHPWQADRA AERLASENRL
ALRQLGVAGL LWFQAMMATM ATWPEFNIDL SPQMHTILRW VALFLTTPIV FYSCAPFFRG
ALRDLRNRQL TMDVSVSLAI GAAYVAGIWT AITGTGELYF DAVGMFALFL LAGRYLERRA
RERTAAATAQ LVNLLPASCL RLDEDGQSPR IMLSELRLAD RVLVRPGAVI PADGTIVEGQ
SSVDESLLTG EYLPQARSVG DAVTAGTLNV DSPLTVKVTA LGQETRLSAI VRLLERAQAE
KPRLAQLADR AAQLFLLFSL MAAALIGVIW WQIDASRAFW IVLAMLVATC PCALSLATPT
ALTAATGTLH TLGLLLTRGH VLEGLNQIDT VIFDKTGTLT EGRLVLRSVQ PLGTLDADTC
MELAAALENR SEHPIARAFG HAPVAAEDVH STPGLGLEGI VGTRRLRIGQ PAFACALSGT
ETLSITDPSG QWLLLGDTQG PLAWLVLDDR LRDDAHGLLH ACKARGWKTL LLSGDSSPMV
ASVAQVLGIE DARGGLRPDD KLAVLRELQA QGHKVLMVGD GVNDVPVMAA ADISVAMGSA
TDLAKTSADA VLLCNRLPVL IDALTLARRT RRIIIENLVW AGLYNGLMLP FAALGWITPI
WAAIGMSVSS LIVVLNALRL TRVPRAAHLS QTAPEVSCPR FTS
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