Gene PSPTO_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1968 
Symbol 
ID1183613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2154679 
End bp2155182 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content58% 
IMG OID637393346 
Productflagellar protein FliL, putative 
Protein accessionNP_791791 
Protein GI28869172 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0636604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA GCGAAGAAGT TGTTAAAGAC CCGGCAGCCA AAGGCAAGCT CAAGCTCATC 
ATCATCGCGG TTGTAGCGTT GCTGCTTGCG GTAGGCCTGT CGGTCGGGGC AACGTGGTTC
CTGATGCACA AGAGCGAAAG CGCGCCAGAC CCGGCAGCCG CCGCAGCGGC AGCGAACGTC
AAGCCAGTGG CGGTGTTCGA ACCCATGACA CCAGCCTTCG TGGTCAACTT CAACGCCAAC
GGTCGCCAGC GCTACATGCA GGTCAGCATC ACCATGCTGG GCCGCAATGC AGCTGACATG
GAAGCGCTGA AAGTGCACAT GCCCCTGATC CGCAATAACC TTGTCATGCT ATTCGCGGCC
ATCCCCTTCG AGTCGCTGGC CTCGCCGATC GGCCAGGAAA TGCTGCGTCA GAAAGCGACG
GCGAGCATTC AGGAAGTGGC ACAGAAAGAA CTCGGCAAGA CTGTGATCGA ACAGCTGCTC
TTCACTAACT TCGTATTGCA GTAG
 
Protein sequence
MAKSEEVVKD PAAKGKLKLI IIAVVALLLA VGLSVGATWF LMHKSESAPD PAAAAAAANV 
KPVAVFEPMT PAFVVNFNAN GRQRYMQVSI TMLGRNAADM EALKVHMPLI RNNLVMLFAA
IPFESLASPI GQEMLRQKAT ASIQEVAQKE LGKTVIEQLL FTNFVLQ