Gene PSPTO_1952 details

Gene Information

• Locus tag: PSPTO_1952
• Symbol: fliS
• ID: 1183597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2138982
• End bp: 2139371
• Gene Length: 390 bp
• Protein Length: 129 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637393330
• Product: flagellar protein FliS
• Protein accession: NP_791775
• Protein GI: 28869156
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.147939
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCGA TGTTAGCGTT GCGGCAGTAT CAGAAGATCG GCTCCCAGGC TCAGACCTCG 
GAAGCCAGCC CTCATCGTCT GGTTCAAATG TTGATGGAGG GTGGCCTGGA CCGTATCGCT 
CAAGCCAAGG GTGCCATGGC GCGCCGTGAC GTCGCCAGCA AAGGCGTGTT CATCAGCAAG 
GCAATCGGCA TTGTCGGTGG TCTGCGTGAA GGGCTGGACT TGGATAACGC CCCCAGCGAA 
GCGCTGGTCA GGCAGGACAG CCTTTATCAC TACATGATGA CGCGTCTGGC CGAAGCCAAT 
GCCCGCAACG ATCAGAAGAT GCTCGACGAA GTCGCCGGTC TGCTGATCAC GGTCAAGGAA 
GGCTGGGACG CGATTGCCAC TGTGCAATAA 

 

Protein sequence

MNPMLALRQY QKIGSQAQTS EASPHRLVQM LMEGGLDRIA QAKGAMARRD VASKGVFISK 
AIGIVGGLRE GLDLDNAPSE ALVRQDSLYH YMMTRLAEAN ARNDQKMLDE VAGLLITVKE 
GWDAIATVQ