| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1887 |
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| Symbol | |
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| ID | 1183532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2060932 |
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| End bp | 2061843 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393265 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791710 |
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| Protein GI | 28869091 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.138595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA TCTTCAACGC GCAGATGCAC GCCTGGTTAC AGGTCTTTGC CTGTGCGGCC
CGACACCTCT CTTTCACCCG TTGCGCGGAG GAACTGCACG TCACCCCCGG CGCGATCAGC
CAGCAGATGC GCCAGCTTGA GGAGCGTCTG GGTTTTGCAC TGTTTCATCG GGTCGGGCGC
GGGCTGGAGC TGACCGCCGA AGGTCAGCGC CTGGCGGTGG TCGCCAACGA AGTGCAGAGC
CGCATCAGCG AAGAGCTGCG CCTGCTGTAT TCGGGGCGCA TCGGCGGGGT ATTCAAGCTG
CGTTGCATTC CGTCATTCCT CAGCAAATGG CTGATGCCAC GCCTGCCGCG CTTGCAGGAC
GCGTTTCCGG ACATCCAGTT GCGGATCATC GCCGAAGACA GCAGCGGGTC GTTGCGCGAT
GACGATTTCG ATCTGGCCAT TGACCTTAAT GACGGCAGCT ATCCGGGGTT ATCGACCACG
CCGTTGCTGG AAGAAGAGCT GTTCCCGGTC TGTTCGCCAA GCCTGCTGGT GGGCAAGCCG
CCGCTGGATA CGCCCAGCCA GTTGGTGCAT TTTCCGTTGT TGCACGACAT TACTGCCTGG
CGCGGCAGCT ACGAATACGC GGAGTGGGAG TTTTACCTGA CCGCCATCGG TGCAGATGGC
ATCGACGTGC GTCGCGGCCA CACCTTCAAC CGCAATCACC TGACCATCGA CGCCGCGCGC
ATGGGCATGG GCGTGGCCAT TGCCCGCAAG GCACTGATTA CCGACGAGCT GGAACAAGGC
TTGCTGATCG TGCCGTTCGG GCATCCGATC AAGGCCAGAA AAAAATACGT CCTGGCCTAT
CGCGAAGGTG CGCTCAGCAC CCCGGCACGC CGCGCGGTGC ATGACTGGCT GGTGGGCGAG
GCAGCACATT AG
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| Protein sequence | MSRIFNAQMH AWLQVFACAA RHLSFTRCAE ELHVTPGAIS QQMRQLEERL GFALFHRVGR
GLELTAEGQR LAVVANEVQS RISEELRLLY SGRIGGVFKL RCIPSFLSKW LMPRLPRLQD
AFPDIQLRII AEDSSGSLRD DDFDLAIDLN DGSYPGLSTT PLLEEELFPV CSPSLLVGKP
PLDTPSQLVH FPLLHDITAW RGSYEYAEWE FYLTAIGADG IDVRRGHTFN RNHLTIDAAR
MGMGVAIARK ALITDELEQG LLIVPFGHPI KARKKYVLAY REGALSTPAR RAVHDWLVGE
AAH
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