| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1855 |
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| Symbol | |
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| ID | 1183500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2027444 |
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| End bp | 2029525 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637393234 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_791679 |
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| Protein GI | 28869060 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0314757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCC CCTTTACTTT GCGTCACGCA AAGCGTTTGT CCGTGTCCCG TTCCATATGG
CCCTTGATGT CGGCCGGTTT ATTCACAATG AGCCCGTTGT GCTCTGCATT GGCCGACACC
GTTAAAGTCG AAGATTCGAC GTTGACGCTC GGTACGGTAA CTGTTCAGGG CGCGACCAGT
GGCCCTTTGA GCACCAGCAG CGTACTTAGC TCAGTGGATA TCCTGGGGGG CGACATCCTT
GAAAAGATGC CAGTCAACTA CAGCTGGGAA CTGTTCAGGC GCGCGCCGGG TGTGATGTTG
ACCGAGTTCA ATCAAGGCAC CACATCCGGC AAGATTTCTT TCCGCGGCTT TAACGGCGAA
GGGGAGGTGA ACGCCATCAA ATTGCTGATT GACGGCATTC CAAGTAACAG CAACGACGGC
AACATGCCGT ACATGGACAT GATCTTTCCG ATGGAGCTGG ACAGCATCGA GGTGGTGCGT
GGCACCAGTG ATGCGCGCTA TGGCCTTAAT AACATTGCCG GCAACGTCAA TATGCTGACC
CGCACGGGCG GCGACTACAA TAAGGCGCGG TTTCGTTACG GCAGCTTCAA TACCCAGGAA
ACTCAGCTAG CCAAAGGCCT TGAGAGCAGC AACTGGACTC AGAATTACTT CTTCGCCTAT
CAAAAGTCAG ACGGTTACCG GGATCACGCC GACGCAGACA AGTTTTCAAT GTCAGGCAAA
TGGTTTTTTA CGCCGGACGA TGACAGTTAC CGTATAGGCC TGATCGCTCG CCACTATGAA
ACCGAGGCGC AGGAGCCGGG GTATCTGACC GAGGACGATG CACGTCATCA CCCCGAAATG
ACCAACAGTT TCAACGCGAC GGATAAAGGC ACCCGGCGTA TGAACCAGGT CAGTCTGCAT
TTCGATACAG ACCTGGCCGA TACGCTCGCT TGGTCAGCGA AGACCTATGT AAACACCCTC
GATGACAGGC GCTGGACGCA GTACTGGCGC ACGAGCTCAC AGCAGGAGCG CGACACTTAC
GAGACTCAAT ACGGCGCCCT TACTTCACTG ACCTGGCGCC CGGAAGTCAT TTGGCTATAC
GATTTCGCCC TTGAGGGCGG TACGGACGTA CAGCAACAGC AAAACCAGAG TGAGCGTTAT
CGCACCAGAG ACCGTGCACG CCTGGCGACC ACTCGCGACC AGCAGTTTGA TTTCGACACC
TATGGCGCTT ATGTCCAGGC CGAAATCAAA CCGTTTGAAT CGCTGAAGAT CGTACCGGCT
TACCGGGTCG ACAAGATTCA GGGCGACTTC ACTAACGAAA TGACTGGCAC GGATTACGAC
ATCAACGATT ACGGGCTGAT CAAGCAGCCG AAAATCAGCA TTGTCTATTC TCCGTGGGAT
GTCGCCAGTT TCTATGCGAA CTGGGGGCGT ACCTTTCAAG TAGGGACGGG GGCTGCTGCC
TACAAGATTC CGCCGAGGGA TACGGACCTT GCACCTTCTA TCAACGAGGG TTGGGAAACC
GGGATCAAGT TCACGCCGGC GGACTGGGTG GATGGTCGAG TCGCCTATTG GCAGCAAGAG
GCTTCCGGGG AAGTCAGTCG CAGGCTGAAC GACCCGAGTG GTGAGTCCGA TAACGTTGGG
GAAACCCGGC GGTGGGGTTA TGACGTGCAA ATGAATCTGC ACCCTGACGA GCGCACTGAG
ATATGGCTGG CCTATTCCTG GCAGTATTCG AAAATACTCC AGCCGAGTGC CACGTTGCCG
GGCAGCAAAG GTCGGGAAAT CGACCATATC CCGCATCACC TTTACAACGC TGGCATCAGC
TATGACGCGA CACCCGCATT ACAGTTGACT GCCTGGATGA ATGGCCAGAC GAACTATTAT
CTGGAGCGGG AAAATACCAA GGGGACTTAC GGCGGTTACG TGCTGATGAA CCTCGGTGCA
ACCTACAAGG TGACGCAGTC AGTAAGCGTT GACCTGCAGT TGAAAAACCT CACCAACCGA
TATTATGAAT ACGTCTGGTA CGACCCGGAC GGTGCCCAGG GATCTCTGCA TTCCCCAGGT
GATGGTCGCG CACTTTACAC CGGAGTGACT GTGGACTTCT GA
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| Protein sequence | MPAPFTLRHA KRLSVSRSIW PLMSAGLFTM SPLCSALADT VKVEDSTLTL GTVTVQGATS
GPLSTSSVLS SVDILGGDIL EKMPVNYSWE LFRRAPGVML TEFNQGTTSG KISFRGFNGE
GEVNAIKLLI DGIPSNSNDG NMPYMDMIFP MELDSIEVVR GTSDARYGLN NIAGNVNMLT
RTGGDYNKAR FRYGSFNTQE TQLAKGLESS NWTQNYFFAY QKSDGYRDHA DADKFSMSGK
WFFTPDDDSY RIGLIARHYE TEAQEPGYLT EDDARHHPEM TNSFNATDKG TRRMNQVSLH
FDTDLADTLA WSAKTYVNTL DDRRWTQYWR TSSQQERDTY ETQYGALTSL TWRPEVIWLY
DFALEGGTDV QQQQNQSERY RTRDRARLAT TRDQQFDFDT YGAYVQAEIK PFESLKIVPA
YRVDKIQGDF TNEMTGTDYD INDYGLIKQP KISIVYSPWD VASFYANWGR TFQVGTGAAA
YKIPPRDTDL APSINEGWET GIKFTPADWV DGRVAYWQQE ASGEVSRRLN DPSGESDNVG
ETRRWGYDVQ MNLHPDERTE IWLAYSWQYS KILQPSATLP GSKGREIDHI PHHLYNAGIS
YDATPALQLT AWMNGQTNYY LERENTKGTY GGYVLMNLGA TYKVTQSVSV DLQLKNLTNR
YYEYVWYDPD GAQGSLHSPG DGRALYTGVT VDF
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