| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1789 |
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| Symbol | |
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| ID | 1183430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1959574 |
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| End bp | 1961844 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393165 |
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| Product | dimethylsulfoxide reductase |
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| Protein accession | NP_791614 |
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| Protein GI | 28868995 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.858784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCA CGTCATTGCA CTGGGGCGCT TATCGTCCGC AGGTTGAGGG CGGCAAGCTG
ACGGCCTTGC TGCCAGCGGA ATGGGACACG CACCCTTCGC CGATTGGCGA TTCGGTAGCC
CAGGCCATTA CCTCGCCGAC GCGCGTCATG CGCCCGGCGG TGCGCCGCAG CTTTCTTGAA
AAAAACGGCG GGTGTCCGCA ACTGCGCGGG CAGGAGCCCT TCGTCGAGGT GTCATGGGCG
GTGGCGCTGG ACCTGGTTGC CAAGGAGTTG CAGCGCGTCA GACGCGAGTA CGGCAATCAG
GCGATTTTTG GCGGCAGCTA CGGCTGGGGC AGCGCGGGGC GCTTTCATCA TGCGCAAAGC
CAGTTGCACC GCTTCCTCAA CTGCATCGGC GGCTATGTGT CCAGCACCGA CAGCTACAGC
CTGGGCGCCG GGCGGGTGCT GATGCCGCAC ATTGTCGGCA ACATGGACTG GCTGCTGGCG
GCGCATACGT CCTGGAACAA CCTCGCCGAG CACTGTGAGC TGTTCGTCGC CTTTGGCGGG
TTGCCCGCCA AGAATGCGCA AACCAGCCCC GGCGGGGCCA GCGACCACCT GTTGGTCGAC
GCGTTGCAAC GTATGTCCGA TGCAGGGGTG CAGTTCGTCA ACGTCAGCCC GCTGCGTGAT
GATCTGGCAG GTCCGACGCA CAACCAGTGG TTGGCGGTAC GTCCCGGCAG CGACACCGCA
TTGATGATGG CGCTTTGCTG GGTGCTTATC AGCGAAGGTC TGCACAACGA AGATTTCGTC
CAGCGCTACA CCGTGGGTTA TGAGCGTTTT CGCGACTACC TGCTGGGCTA CACCGACGGC
CAGCCGAAAG ACCCGCGCTG GGCGGCGGCG CTGACCGATA TTCCGGCAGA GCAGATTGTC
GAACTGGCGC GGCGTATGGC CAGCAAGCGC ACCATGATCA ATGTCGCCTA TTCACTGCAG
CGCTCCATTC ATGGGGAGCA ACCGTTCTGG ATGACCGTTA CCCTCGCGGC ATTGCTGGGG
CAGATCGGCT TGCCCGGTGG TGGATTCGGC CTGGGTTATG GCTGTATGAA CAACACCGGC
AGCGGCCGCA AGGCGTTTTC CGGGCCGCGC TTTTCCCAGG GCAGTAACCC GATCAAGGCA
TTTATTCCGG TGGCACGGGT GACCGACATG TTGCTCAACC CCGGCACGTC GTTCGATTAC
AACGGCCAGC AGCAGACTTA CCCGGACATC CGGCTGGTGT ACTGGGCGGG CGGCAACATC
TTTCACCACC ATCAGGACCT CAACCGACTG CTGGAGGCCT GGAAGCGACC GCAAACCATC
ATAGTTCACG AACAGTTCTG GACCGCTCAG GCGCGTTATT CGGATATCGT GCTGCCCGCG
ACCACGGCAC TGGAGCGCAA TGACATCGGC AGTTCGGCGT CTGACCGCTT CATGATCGCC
ATGCAACAGG CCATCGAGCC GGTGGGCGAG TCCCGCGATG ATTATTCGAT TCTGGCCGGG
CTGGCTGAAC GGCTTGGCGT CGAACAGGCG TTCACCGAAG GTCGCGATGC CCAAGCCTGG
CTGCAATTCA TTTACGACGA ATCCCGTGAG CGCGCTGAAA CTTTCGAAAT TGCTCTGCCG
GACTTCGCGC AGTTCTGGCG TGACGGTTTG CTGGAAATCG ACTATCCGCC CACCGATAAC
GTACTACTCA AACCCTTTCG CGACGACCCC GATACGCACC CGTTGCCAAC GCCGTCCGGG
CGCATCGAGA TTTTCTCCGA GCGCATCGCC GGGTTTGGCT ATGCCGACTG CCCCGGCCAC
CCGGTGTGGC TGGACAAACC CGCGCCGAGC CATGCGCTGC ATCTGCTCTC CAATCAGCCC
AAAACCCGTC TGCACAGCCA GTACGACCAC GGCAGCTACA GCCGAGCCTC GAAAATACAG
GCCCGTGAGC CGCTGACCCT CAACCCCCTG GATGCGCAGC TGCGCGGGGT GGTCGATGGC
GACGTGGTCA AGGTGTTCAA CGAGCGAGGG GCGTTTCTGG CGGGCGTCAT CGTGTCGGAC
GGTATCCGGC CCGGCGTGGT GCAGATCGCC ACCGGCGCGT GGTTCGATCC GCTGGTGCAT
GGCGAGCCTG GCAGCCTGGA AAAGCACGGC AATCCCAATG TGATTACGCT GGATGTCGGC
GCCTCCAGCC TGTCGCAAGG CTGTGCTGCG CAGACCGCTT CAGTAGAAAT CGTCAAATGG
GATCAGGCGG TGCCGCCGGT GACGGCGTTC GAGCCGCCGC CATTGCTCTG A
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| Protein sequence | MSFTSLHWGA YRPQVEGGKL TALLPAEWDT HPSPIGDSVA QAITSPTRVM RPAVRRSFLE
KNGGCPQLRG QEPFVEVSWA VALDLVAKEL QRVRREYGNQ AIFGGSYGWG SAGRFHHAQS
QLHRFLNCIG GYVSSTDSYS LGAGRVLMPH IVGNMDWLLA AHTSWNNLAE HCELFVAFGG
LPAKNAQTSP GGASDHLLVD ALQRMSDAGV QFVNVSPLRD DLAGPTHNQW LAVRPGSDTA
LMMALCWVLI SEGLHNEDFV QRYTVGYERF RDYLLGYTDG QPKDPRWAAA LTDIPAEQIV
ELARRMASKR TMINVAYSLQ RSIHGEQPFW MTVTLAALLG QIGLPGGGFG LGYGCMNNTG
SGRKAFSGPR FSQGSNPIKA FIPVARVTDM LLNPGTSFDY NGQQQTYPDI RLVYWAGGNI
FHHHQDLNRL LEAWKRPQTI IVHEQFWTAQ ARYSDIVLPA TTALERNDIG SSASDRFMIA
MQQAIEPVGE SRDDYSILAG LAERLGVEQA FTEGRDAQAW LQFIYDESRE RAETFEIALP
DFAQFWRDGL LEIDYPPTDN VLLKPFRDDP DTHPLPTPSG RIEIFSERIA GFGYADCPGH
PVWLDKPAPS HALHLLSNQP KTRLHSQYDH GSYSRASKIQ AREPLTLNPL DAQLRGVVDG
DVVKVFNERG AFLAGVIVSD GIRPGVVQIA TGAWFDPLVH GEPGSLEKHG NPNVITLDVG
ASSLSQGCAA QTASVEIVKW DQAVPPVTAF EPPPLL
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