Gene PSPTO_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1758 
Symbol 
ID1183395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1930396 
End bp1930965 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID637393130 
Producttranscriptional regulator, TetR family 
Protein accessionNP_791583 
Protein GI28868964 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.295684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTACG CGCTCGATCA TAAGGCCCAA ACCCACCAGC GCATCGTCAA GGAAGCGTCC 
ATGCGCTTTC GTCGCGACGG CATTGGTGCT ACGGGCTTGC AACCATTGAT GAAAGCACTC
GGCTTGACCC ATGGCGGTTT CTACGCGCAT TTCAAATCCA AGGATGATCT TGTCGAACAG
GCATTGAGTC ACGCTCTCGA CAATGTAAAA GGAATCACAA GCGAAGTTTT CGCCAGACAG
GACTCGCTCA GTGAATTCAT CGATCTCTAT CTCTCGACTA CCAGCCGCGA TGCGCAGGAC
GGCGGATGTC CGCTGCCTAC CATGTGCCTG GAACTTGGAC AGCGCGACCA ACCCAGCGAG
ACGACGGATA AAATCGTCCT TCACTTGCTG GAACTGTTTG AGAACTCCCT CGCGGGGACC
GGTCTTGAGC CCAGAAGCGT ACCGATCCTG TCGGCACTGG TAGGCGGGCT GGTACTTGCC
CGCAGTGCTG CGGACGACAA GTTGTCGGAG CGTATCCTGA ATACGACCCG CGACTACCTC
AAGCAGGAGA TAAAAAAGAG CACTAACTGA
 
Protein sequence
MRYALDHKAQ THQRIVKEAS MRFRRDGIGA TGLQPLMKAL GLTHGGFYAH FKSKDDLVEQ 
ALSHALDNVK GITSEVFARQ DSLSEFIDLY LSTTSRDAQD GGCPLPTMCL ELGQRDQPSE
TTDKIVLHLL ELFENSLAGT GLEPRSVPIL SALVGGLVLA RSAADDKLSE RILNTTRDYL
KQEIKKSTN