| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1712 |
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| Symbol | cobC |
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| ID | 1183349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1881932 |
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| End bp | 1882936 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637393084 |
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| Product | cobalamin biosynthesis protein CobC |
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| Protein accession | NP_791537 |
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| Protein GI | 28868918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.394156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGC ACGGCGGGCG GCTGCGCGCA GCGGCGCAGC GTTACGGTAT CGATCAGGCC
GACTGGCTGG ACCTGTCCAC CGGCATCGCG CCTTGGCCGT GGCCGATTCC CGATATACCG
GCGTGTGCCT GGGCGCGGCT GCCCGAGACC GAAGACGGTC TGGAAGCCGC GGCCTGTGCC
TATTACGGTG TGCCTCAATT GTTGCCGGTG TCTGGTTCGC AAGCCGCGAT TCAGGCGCTG
CCACGGGTGC GCAGCGGCGG GCGGGTCGGC GTGTTGTCGC CGTGTTATGC CGAGCACGCG
CATGCCTGGC GCAAAAGCGG CTATGTCGTG CGTGAGGTCG GCGAGCAGGA GGTCGAGTAT
TTTCTCGACA GCCTCGACGT ACTGGTGGTG GTCAACCCCA ACAACCCGAC CGGCCTGCAC
CTGAGCACCG AGCGCCTGCT GGAATGGCAT GCGCGACTGG CCGAGCGCGG TGGCTGGCTG
GTGGTGGATG AAGCGTTCAT GGACAACACG CCAGGCCTGA GCCTGGCGGC CGAGACCTGG
CGCATCGGGC TGATTGTGCT GCGTTCGTTC GGCAAGTTTT TCGGCCTGGC CGGGGTTCGG
CTTGGCTTTG TGCTGGCTGA GCCGGTCTTG CTGAAAATGC TCGCACAGGA GATCGGCCCG
TGGTCGGTCA GCGGCCCGAC CCGGATCATC GGCCAGGCCT GCCTGAGCGA TCTGCCTGGG
CAGGCCCGGC AACGCGAGCG CAGTGATCGG GCCTGCGACC GGCTGGTGGC ATTGCTTGAT
CACTACGGTC TGACGCCAGA TGGCGGCTGC GCGCTGTTTC AATGGTTGGT GACTGCCGAG
GCGCAGTCGC TTTACGAGTT CTGTGCGCAA CGCGGCGTCC TGTTGCGTCT GTTCATGGGT
GACACGCCCG AGTCTGGCAG CCTGCGTTTC GGCTTGCCCC GCGACGAGGC CGACTGGCAG
CGTCTGCACA ACGTTCTGCT TGAATACCGC AAGGAGTTTG CATGA
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| Protein sequence | MLEHGGRLRA AAQRYGIDQA DWLDLSTGIA PWPWPIPDIP ACAWARLPET EDGLEAAACA
YYGVPQLLPV SGSQAAIQAL PRVRSGGRVG VLSPCYAEHA HAWRKSGYVV REVGEQEVEY
FLDSLDVLVV VNPNNPTGLH LSTERLLEWH ARLAERGGWL VVDEAFMDNT PGLSLAAETW
RIGLIVLRSF GKFFGLAGVR LGFVLAEPVL LKMLAQEIGP WSVSGPTRII GQACLSDLPG
QARQRERSDR ACDRLVALLD HYGLTPDGGC ALFQWLVTAE AQSLYEFCAQ RGVLLRLFMG
DTPESGSLRF GLPRDEADWQ RLHNVLLEYR KEFA
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