Gene PSPTO_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1685 
Symbol 
ID1183322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1855049 
End bp1855720 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID637393057 
Producthypothetical protein 
Protein accessionNP_791510 
Protein GI28868891 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACT ACAAATGGCT GAACGAGTAT TGCCTGAATC GATTCGGCTC CGCCAAAGCT 
CTGGAAGCCC ACCTGCCCTC GCCCAAGACT GCGAAACAAC TGCAAGCCAT CAGCGCCGAC 
CGTTACCTGT CGACCATGGC CCTGCGCGTG TTTCGTGCAG GCCTGAAACA CAGCCTGGTG 
GACTCCAAAT GGCCAGCGTT CGAAGAAATG TTCTATCGCT TCGACCCGGA AAAAGTCGTG 
CTGATGGGCG CCGACCATCT GGAACGTCTG ATGCAGGACG CACGCATCAT TCGTCACCTG 
GGCAAGCTCA AGAGCGTGCC GCGCAATGCG CAGCTGATTC TGGACATCGA GCAGGAACAC 
GGCAGTTTCG GCACATTCAT CGCACAGTGG CCGGTCGTTA ACATCACCGG GCTGTGGCAG 
TACCTCGCCA AGCACGGCAA CCAGATGGGC GGGTTGTCAT CGCCGCGGTT CCTGCGCATG 
ATCGGCAAGG ACACGTTCAT TCCCACCTGG GACGTGGTCG CCGCATTGAA CGCGCAGGAT 
ATCGTCGACA AAGTGCCGAC CAGCAAACGC GATCAGGCCA TTGTGCAGGA CGTGTTCAAC 
CAGTGGCATG CCCAGAGCGG TCGGCCGATG TGCCAGCTGT CAGCCATGCT GGCCTTCACC 
GTCAACCACT GA
 
Protein sequence
MHDYKWLNEY CLNRFGSAKA LEAHLPSPKT AKQLQAISAD RYLSTMALRV FRAGLKHSLV 
DSKWPAFEEM FYRFDPEKVV LMGADHLERL MQDARIIRHL GKLKSVPRNA QLILDIEQEH 
GSFGTFIAQW PVVNITGLWQ YLAKHGNQMG GLSSPRFLRM IGKDTFIPTW DVVAALNAQD 
IVDKVPTSKR DQAIVQDVFN QWHAQSGRPM CQLSAMLAFT VNH