Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1676 |
Symbol | |
ID | 1183313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1847662 |
End bp | 1848135 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393048 |
Product | hypothetical protein |
Protein accession | NP_791501 |
Protein GI | 28868882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGGAGT GGTTACCGCT TTTTACCCGG CCTGTTCTGG TAGACATTCT GTTGAATGCC TGGCGCTATC AACAGGCTAA TCAAGGACTG CAGCTCTTCG GGTATGTTGT ACTGGAAAAC CATTTGCACT TTGTGGCCCA AGCGCCCGCT CTGGACAAAT GTGTGAGCAG TTTCAAGTCG TTTACGGCTC GACAGATAAT CGAAGCACTT GAGAACGCCA ACGCCGAGAG CACGTTGGAG CGTCTGCGGT TTGTCAAGCG CCTGCACAAG AGTGACAGGG TTTATCAGGT CTGGCAGGAA GGAGCCCATG CCGAACTGGT GTGGAGCGAA AAGGTTATGC GGCAGAAGCT CGATTACATT CACCATAACC CGGTAAAGAG GGGCTATGTG GACGTCGGCG AGCACTGGAG ATATTCCAGC GCCCGAGATT ATGAAGGGCA GCGCGGTTTG ATCGATATTC AACGCTGGTG TTAA
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Protein sequence | MVEWLPLFTR PVLVDILLNA WRYQQANQGL QLFGYVVLEN HLHFVAQAPA LDKCVSSFKS FTARQIIEAL ENANAESTLE RLRFVKRLHK SDRVYQVWQE GAHAELVWSE KVMRQKLDYI HHNPVKRGYV DVGEHWRYSS ARDYEGQRGL IDIQRWC
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