| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1613 |
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| Symbol | |
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| ID | 1183250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1768630 |
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| End bp | 1769010 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637392985 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | NP_791438 |
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| Protein GI | 28868819 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0395666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA CAAGGCTAAA TAAAATGATC TCGGTGCCGA TTTACTCTTT AGGTCATGAA
GTCATGGAAG ACGAATGTAA GAATCATCCT ACAAATTTGT CTGTGTGCAA GATAATAGCA
AGAGGGAATA TCATGTGGGT GACCATTAGA GAGCAGGACG TTCTTGGCCT GTTGTTGCAG
GGCTGCACGA ACAAGGAAAT CGCCAGGCAG CTCAGTATCA GCGACTATAC CGTGCGTGAT
CACGTGTCTT CATTGCTCAG AAAAAATCAG GTAAAGACTC GTGCCGAGCT GATGGCGCGA
TGCGTTTCTT TGTTACTGCC AGAAAAAAAT ACCCGACCCC CTACATCTGT CGGATTGTGC
GGCGAGCCAG CGCCTACATA A
|
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| Protein sequence | MKKTRLNKMI SVPIYSLGHE VMEDECKNHP TNLSVCKIIA RGNIMWVTIR EQDVLGLLLQ
GCTNKEIARQ LSISDYTVRD HVSSLLRKNQ VKTRAELMAR CVSLLLPEKN TRPPTSVGLC
GEPAPT
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